Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1521 ATGACCAAAATGGCGTCGTATGAGGAACAACATGAGATGGATCATCAAGACGACGACGGAGTAACAACGGATCTCAGCACCAGCGACGCAGACCCTTCCGATACCAACAACAACATCAATGGAGTTCAACTCTTCCCACTGAAGGAGGAACCAACCGATTCAGACCCAATGGGGATCGTTCCCGCGCCCATGCAGCTTCCAGTTACCGTGCCGGGCAAACCCCCCAGGCGTTCCTCCACCAAGGACCGCCACACAAAAGTTGAAGGCCGTGGCCGCAGGATCCGAATACCCGCCACATGCGCTGCTCGGATCTTTCAGCTGACTCGAGAGTTAGGCCACAAATCCGACGGTGAAACCGTCCGGTGGCTTCTCGAACACTCCGAACAGGCAATCATCGAGGCCACCGGAACCGGCACAGTTCCGGCGATCGCGGTCTCAGTCGGAGGCGCTCTGAAAATCCCAACGACCTCGTCTACCGCGAACCAGAACCAAACCGAGGAAGCGTCGAACAAGAAGCGGAAACGGCCTTCCAGCAGCGAGTTCGTGGATGTAAGCGACGCCGTTTCGCAGTCGTCGGGTCTGGCCCCGGTTCAAGTTCCGCAAGGTCTGGTGCCAGTTTGGGCGGTGGGTAACCCGAGTATGGTGGTCCCCGCTAATAGTCTGTGGATGATCCCACAGGGCGGTGTTACGGGCCCGTCGAACCAGCAACCTCAGATATGGGCCTTGTCTCCGTCGGTATTGAACGTGGCGGGGCGGCCCATATTACCTCTGGTGGGAACGAGGAATGTTGGAGAAACTTGGGCGAGTTGCAGTGGCACGTCGAGCAGCGTGGGGGCTAAGGTGGGAACTGAGTGTAGCAATAGCATGGCACCGAGTGTTAAGAGTGGGGATTGTGGCGTTCCTAACGATGGTAGTAAGGTTAAAATGTTGAGGGATTTTTCTTTGCAAATTTACGATAAGCAAGAGTTGCAGTTGATGGGTCGCTCCGGGACTGGGACTTAA 1002 0.5619 MTKMASYEEQHEMDHQDDDGVTTDLSTSDADPSDTNNNINGVQLFPLKEEPTDSDPMGIVPAPMQLPVTVPGKPPRRSSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHSEQAIIEATGTGTVPAIAVSVGGALKIPTTSSTANQNQTEEASNKKRKRPSSSEFVDVSDAVSQSSGLAPVQVPQGLVPVWAVGNPSMVVPANSLWMIPQGGVTGPSNQQPQIWALSPSVLNVAGRPILPLVGTRNVGETWASCSGTSSSVGAKVGTECSNSMAPSVKSGDCGVPNDGSKVKMLRDFSLQIYDKQELQLMGRSGTGT* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1521 333 MobiDBLite consensus disorder prediction 23 41 - -
Apr10g1521 333 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 8 330 IPR005333 GO:0003700
Apr10g1521 333 MobiDBLite consensus disorder prediction 1 41 - -
Apr10g1521 333 MobiDBLite consensus disorder prediction 62 89 - -
Apr10g1521 333 MobiDBLite consensus disorder prediction 154 180 - -
Apr10g1521 333 MobiDBLite consensus disorder prediction 1 22 - -
Apr10g1521 333 PANTHER TRANSCRIPTION FACTOR TCP9-LIKE 8 330 - -
Apr10g1521 333 ProSiteProfiles TCP domain profile. 80 134 IPR017887 -
Apr10g1521 333 Pfam TCP family transcription factor 79 175 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1521 Apr-Chr10 27671178 27672561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1521 72 326 TCP Transcription Factor Family AT2G45680 47.119 4.31e-72 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Apr10g1521 TCP 3.4e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1521 - - gmx:100781096 399.438