Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1517 ATGGCTTCAAGTTGCGGCAAACATGCGTCATCCCTTCTGCTGAAGGACTACCTAAGGGACGACCTAAGCTCGTGTTCATCGAGCGGTTTCAAATCGTTCCCTCGGCGACAATGCTGCACCACCGTGGGATTCCTCAAGGAGAAAGATCTCCAACTTCAACGCAAAAAGAGGAACACGCGTCCTCGACGACGACATGATTCCTCTTCTTTTTCCACCGTTTCGGCTCTGCAGAGAGCTTCGGAAGCTGTAATGAACGCCATCAAGGCACTGCCATTATCCGCAAAAGCCAAAAAAGGTCTTCTTTCTAGAAGCCTCTCGAGGAAGCTGTTGAGCAGAAGGTTCTGGAGAAAAACAGCGAAGGAAGAGGAAAGCGAGGGCGTGCGAAGGAGAAGAACATCTTTCCGCGACCTCATTATGGAAGAAAAGGAGCGTGATAAAACGTCGTCGTTTAAGGAGGATACCGTATTCGCTGCTCCAAGCTTCACCGCATCTTCAGGTTGTGACAGTAACAGCTGGGGAGAAAGCGAGTTCACTTTTGCGTCTACTGTTACTTCTTCTGGGATCTCCAACGACAGTGAAGCAGTTCAACTTCAAGGCACAAAAGAGGGTTCGCTACATCACAAGATCGACGGAGTCACCACCATAGATTGGCCGAATGAGAAGGAACAGTTTAGTCCTGTATCGATACTAGACTGGCCATTTGATGAAGAAGAGTGCCACAAGTCTCATTTCAATTCCACTTCCACTACTTGTTCCTTGTTGGAAGGAGCCAAACACAAACATATGCAGAAAAGACGACATTTTAAAAATTTGGCTTCACTGGAACCGGTGGCTTTAGAGAAAAGGTTTGCATGGTCTGAGTTGGAGGATGAATCGCACAACCATTCTACAAAACAATGTTCAGTATCAGTGCCAATTATGCGCACCCAAAATGGGAACAACAACGTGCGACATCACAACATAGAGGAGAATGCGCGTGATCTTCTCAGCCTCGTTAAATGGTCAAATTCGTCCAATAGTTTAATAGTTGAGTTAGAGAACCTGTTGTTTGATTACTTCAAGCAGAGCATTGAGGAAAACAAAGATATTGATCATTCAAAGAAGCTTCACCTTTGCAAGGTAGCGGAGGATTGGATACATGGGGAAGCCCAAGAACTGTATTTGGGTTGGGAAGTGCAAGGAGGAAGGTGCGTCTACATTAGGGAGATGGACAAGTGTAAGGAGTGGAAAAACTATGGTCAAGATATACAACACTTGGTTCTGGAACTAGAAAATGAGGTCTTTGCTGATTTGGTTAACGAGCTTCTACTTGATTGA 1317 0.4563 MASSCGKHASSLLLKDYLRDDLSSCSSSGFKSFPRRQCCTTVGFLKEKDLQLQRKKRNTRPRRRHDSSSFSTVSALQRASEAVMNAIKALPLSAKAKKGLLSRSLSRKLLSRRFWRKTAKEEESEGVRRRRTSFRDLIMEEKERDKTSSFKEDTVFAAPSFTASSGCDSNSWGESEFTFASTVTSSGISNDSEAVQLQGTKEGSLHHKIDGVTTIDWPNEKEQFSPVSILDWPFDEEECHKSHFNSTSTTCSLLEGAKHKHMQKRRHFKNLASLEPVALEKRFAWSELEDESHNHSTKQCSVSVPIMRTQNGNNNVRHHNIEENARDLLSLVKWSNSSNSLIVELENLLFDYFKQSIEENKDIDHSKKLHLCKVAEDWIHGEAQELYLGWEVQGGRCVYIREMDKCKEWKNYGQDIQHLVLELENEVFADLVNELLLD* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1517 438 PANTHER OS04G0572500 PROTEIN 11 438 - -
Apr10g1517 438 PANTHER OS04G0572500 PROTEIN 11 438 - -
Apr10g1517 438 MobiDBLite consensus disorder prediction 50 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1517 Apr-Chr10 27625812 27629254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1517 7 438 TRM (TON1 Recruiting Motif) Superfamily AT4G23020 27.835 8.86e-34 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1517 - - gmx:102663212 468.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1517 10 27625812 27629254 Apr10g1517 10 27625812 27629254 ECH