Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1515 ATGGCCTCATCATCTTCAAATTCAAAGAGGCACCTTGTGTACCATGGAATTCGATGCCGTGGAGGAAAATGGGTAACTGAAATCCGTGAGCCACGTAAGACAAGCCGCATATGGCTTGGCACATTTCTCACGCCGGAGATGGCCGCTGCCGCCTACGACGTGGCGGCGTTGGCCTTGAAAGGCGAGGAAGCTGTTCCCAACTTCCCTGAATCGGTTAGTAGGTATCCAATACCCGCATCCAAATCCCCTGCGGACATCCGCACTGCAGCTATTGCTGCAGCGGAGCTCATGAAGCCTGAAGCCAACCACAACTACAACGCGTCAACAACTAATAATGCAGTAGTTCAGCATGACAACAGTGGTTGTGTTGATGATAACGTTGGTCCTTTGTCTGAAACTGAGTTTCTGGATGAAGAAGCCTTATTCTCGATGCCAAGTTTGTTGGTGGACATGGCTGAGGGAATGTTGCTATCCCCTCCCAGAATGAGCCCTCCACCGTCGCAAAACTCGCCGGAATGTTCTGCTGGAGAAACTTTGTGGAACTTTTGA 549 0.5064 MASSSSNSKRHLVYHGIRCRGGKWVTEIREPRKTSRIWLGTFLTPEMAAAAYDVAALALKGEEAVPNFPESVSRYPIPASKSPADIRTAAIAAAELMKPEANHNYNASTTNNAVVQHDNSGCVDDNVGPLSETEFLDEEALFSMPSLLVDMAEGMLLSPPRMSPPPSQNSPECSAGETLWNF* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1515 182 PANTHER ETHYLENE RESPONSE FACTOR 1 182 - -
Apr10g1515 182 MobiDBLite consensus disorder prediction 160 182 - -
Apr10g1515 182 SMART rav1_2 13 75 IPR001471 GO:0003700|GO:0006355
Apr10g1515 182 Pfam AP2 domain 14 61 IPR001471 GO:0003700|GO:0006355
Apr10g1515 182 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 1 182 - -
Apr10g1515 182 SUPERFAMILY DNA-binding domain 14 71 IPR016177 GO:0003677
Apr10g1515 182 Gene3D AP2/ERF domain 13 71 IPR036955 GO:0003700|GO:0006355
Apr10g1515 182 ProSiteProfiles AP2/ERF domain profile. 13 69 IPR001471 GO:0003700|GO:0006355
Apr10g1515 182 MobiDBLite consensus disorder prediction 168 182 - -
Apr10g1515 182 CDD AP2 14 71 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1515 Apr-Chr10 27611724 27612272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1515 8 182 AP2-EREBP Transcription Factor Family AT5G52020 50.847 5.39e-44 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Apr10g1515 AP2 1e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1515 - - gmx:100793589 240.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1515 10 27611724 27612272 Apr10g1515 10 27611724 27612272 ECH
Apr10g1515 10 27611724 27612272 Apr7g0621 7 12859808 12860347 PCT