Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1510 ATGTTGGCTGGGTGTTCTAGTTCAACATTGTTGTCACCAAGGCACAGATTGAGGAGCGAAGCATCTGCACAGTTTCAAGCTTGTCACTTTCAGCAATCTTCCATGAGCACGCAGAGATTGGACTTGCCATGTAGCAGCTTCCCACGGAAAGACACCTCTTCACGTTCTCAGCCATTGAGGCCAGTTGGGCTTTCAGTGGAGAAACCAATAGAAGCAAAGACAAGCACTTGTTCTCTCAAGACGAACATTCGACTTCCACCTTTGGCAACAACCACAAGCGTTCACACAGCAGCAACAGCAACACCACTGGGGGATTCTATCAAGGATGAGTTTTGGGAGAAGGGTGACAACAAGAGTTTGAAGAGGCTTGCTGAGCATGATCATGAGTCCTTCACCAACAGGGCCAAAAGGAAAAAGGGTGGTGGCAATGATTGTGATAATGGGAACAACAACTTTTGGTTTCAACCTGGTATTGATACTTTCGGAGGACTTAACACTTCACTTCCTTTTTCTCTTAACTGTTCAGGTGAAGAGGAAGAAAGGGTTTGTTTTATTCCTTCTGAAGTGGTTTCTCATTCCTCACCTTTGCCTTTGTCTAATAACCCTTGGCTAGAATCTGGTGTCACAAAGATCACCAATTTTGGTGAAGGTAGCCACCGTGGTGTTCATCATGACCCTCATGTAAAAGAAGGGTCAGTTTCCAATGCTTCTTCAGAGAGCCAAAGCTTGAGCCTGAGGCTAAACGAGAATGCATCAGAACATGAAGTGGGAAACGGTTCAGGGAACCCTTATCATCACCATGAGGTGGAGACAGGAGAAGAGGAGGAGCAAGAGGAGCATCATGGGTTTGAGCTTGTAAGCCTGCTCACTGGTTGTGTTGATGCAATTGGATCAAGAAACGTGGCTGCAATCAACCATTTCATTGCTAAACTGGGTGATCTTGCATCTCCAAAAGGAACTTCAATAAGCCGAATTTGTGCTTATTTCACAGAAGCCTTAGCCATTAGAGTCACAAGGCTTTGGCCTCATATTTTTCACATCACACCCACTTCTCGAGACTTAGATAGAGTAGTGGATGATGATGAAACTGGCACTGCCTTAAGGCTTCTAAACCAAGTCACCCCAATTCCCAAGTTTCTTCATTTCACATCAAATGAGATGCTGTTAAGAGCCTTTGAAGGGAAAGACAAGGTTCACATCATAGATTTTGACATAAAGCAAGGGCTTCAATGGCCTAGCTTGTTCCAAAGCTTGGCTTCTAGAACAAACCCTCCAAGCCACGTTAGAATCACGGGTATTGGTGAATCAAAGCAAGAACTTAACGAAACTGGAGACAGGCTTGCTGGTTTTGCTGAAGCACTGAACCTTCCCTTTGAGTTTCACCCAGTTGTGGATAGACTCGAAGATGTGAGACTTTGGATGCTTCACGTGAAGGAACACGAGAGTGTCGCTGTGAACTGTGTTTTGCAGCTTCACAAGACCCTTTATGATGGAAGTGGAGGAGCTTTAAGAGATTTTTTGGGGCTCATTAGAAGCACCAATCCTTGTGTTGTTGTTATGGCAGAGCAAGAAGCAGAACACAATGAGGCAAGGTTGGAGGCTAGAGTGTGTAACTCATTGAAGTATTATTCTGCGGTTTTTGATTCTATTGATGAGAGTGGACTTACACAAGAGAGTGGAGCAAGAGTGAAGATAGAAGAGACGTATGGAAGGGAAATAAGGAACATTGTTGCATGTGAAGGAAGGGACAGGTTGGAGAGGCATGAGAGTTTTGGGAAATGGAGGAGGATGATGGTGGAGCAAGGAGGGTTCAGATGCATTGGAGTAACTGAGAGGGAAATGAGTCAGAGCCAGTTGTTGTTGAAGATGTATGCTTGTGATAAGTATTGTGTGAAGAAACAAGAGAGTGAAGGAGCTGCAGGAGTTACTCTTGGTTGGTTAGACCAAGATTTATATACGGTTTCAGCATGGGCACCAGTTGATGTTGCGGGTAGTTCATCCTCTTTTTCTCAGCCAACTTGA 2022 0.4471 MLAGCSSSTLLSPRHRLRSEASAQFQACHFQQSSMSTQRLDLPCSSFPRKDTSSRSQPLRPVGLSVEKPIEAKTSTCSLKTNIRLPPLATTTSVHTAATATPLGDSIKDEFWEKGDNKSLKRLAEHDHESFTNRAKRKKGGGNDCDNGNNNFWFQPGIDTFGGLNTSLPFSLNCSGEEEERVCFIPSEVVSHSSPLPLSNNPWLESGVTKITNFGEGSHRGVHHDPHVKEGSVSNASSESQSLSLRLNENASEHEVGNGSGNPYHHHEVETGEEEEQEEHHGFELVSLLTGCVDAIGSRNVAAINHFIAKLGDLASPKGTSISRICAYFTEALAIRVTRLWPHIFHITPTSRDLDRVVDDDETGTALRLLNQVTPIPKFLHFTSNEMLLRAFEGKDKVHIIDFDIKQGLQWPSLFQSLASRTNPPSHVRITGIGESKQELNETGDRLAGFAEALNLPFEFHPVVDRLEDVRLWMLHVKEHESVAVNCVLQLHKTLYDGSGGALRDFLGLIRSTNPCVVVMAEQEAEHNEARLEARVCNSLKYYSAVFDSIDESGLTQESGARVKIEETYGREIRNIVACEGRDRLERHESFGKWRRMMVEQGGFRCIGVTEREMSQSQLLLKMYACDKYCVKKQESEGAAGVTLGWLDQDLYTVSAWAPVDVAGSSSSFSQPT* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1510 673 ProSiteProfiles GRAS family profile. 276 658 IPR005202 -
Apr10g1510 673 MobiDBLite consensus disorder prediction 231 257 - -
Apr10g1510 673 MobiDBLite consensus disorder prediction 214 281 - -
Apr10g1510 673 MobiDBLite consensus disorder prediction 266 281 - -
Apr10g1510 673 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 662 IPR005202 -
Apr10g1510 673 Pfam GRAS domain family 285 657 IPR005202 -
Apr10g1510 673 PANTHER SCARECROW-LIKE PROTEIN 28 6 662 IPR030027 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1510 Apr-Chr10 27550858 27553812 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1510 1 657 GRAS Transcription Factor Family AT1G63100 57.143 0.0 689
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Apr10g1510 GRAS 2.5e-125 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1510 - - gmx:100786173 920.613