Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1507 ATGGGTAAGGCGTCGAAGTGGCTTCGCGGGTTGCTGGGTCTTAGAAAAGCAGAGTGTAGTACTTCGCCCGCCAAGCCGCAGAAAGAGAAACGCCGTTGGAGCTTCGTCAAAGCATACCCGGAGAAAGATAATAGCACTCCCGCCACCGTCGCAGAACACGTGGATAACGCCAACAACACCAAGCACGCCATGGCAGTGGCTGCGGCCACCGCTGCGGTGGCCGAGGCCGCGGTGGCTGCTGCCGAAGCGGCTGCCGTTGTTGTCAGACTCACTAGCAGCAGCGGCCGGTGCGCCGACGCCGGTGCGGTCAGGATTCGCCAACATTGGGCCGCCGTTAAGATCCAAGCCGCTTTTCGAGGCTGTTTGGCAAGGAGAGCACTCCGAGCACTGAAAGGGTTGGTGAAGCTGCAAGCACTTGTGAGAGGTCAAATTGACAGGAAACGGACAGCAGAGTGGCTTAAAAAGGTGCAAGCACTCTTACGAGCACAGGCACAAGTTTCTGCAGGGTGGACTCTTCAGACCCCATCTTCGAGTGCAAAATTATCTAGCCATCTCCATGGTCCAGCAACACCTGAAAAATTTGAAAGTCCTATAAGATCTAAGAGCATGAAATATGAGCACTCACCTATACTCAAGAGAAATGGCTCCAAATCATGTGTCCAGATCAATGGTAATCAAGAGATATGTTGGAATAGATCAGAGAGCCAGGTACATGAACCATCATGGAACCAAGGAAGCTCGTTGATAAGAGCTTACAGCTCCAATGATGAAAGAAATGACAGGATTCTTGAAATTGATTCTGGAAAACCACACTCCACACCCAAACGTAGAAACCTCTCTTTCTCCAACAGTAATGCTTTAGGTTCTGATCATTATAGTAAGAGTTTGAACAGCACAAAGGAGTCAACATCCCTTCAATCTGTTCAAAGTCCATATTGTGAAGTTCAGTCTTACAGCTCCCAGAAAATCAACGAGGTTGAAGAGAGCCCATTCTGCACTGCAGACAATAGTCCCCAATATTTATCTGCCACCTCTAAAGATGATGGCTTCAGAAGAAGTCCTTTTACTCCTACTAAGAGTGATGGCTCAAGAAGCTATCTTCGTGGTTATTCTGACTACCCAAGTTACATGGCATACACTGAGTCTTCAAAGGCCAAGGTCAGATCTCTAAGTGCCCCAAAACAAAGGCCCCAATATGAGAGGTCCACTTCATCATCTAATAGATACTCACTGAATGGATTTGACGTGTCAAGGTTGGCCACACACAAGGCATCTGCAATGCATACAAGTTTCTACAACAAAGCTTATCCAGGTTCTGGTCGTTTAGACAAACTTGGTATGCCTGTGGGGTATAGATACTGA 1362 0.4809 MGKASKWLRGLLGLRKAECSTSPAKPQKEKRRWSFVKAYPEKDNSTPATVAEHVDNANNTKHAMAVAAATAAVAEAAVAAAEAAAVVVRLTSSSGRCADAGAVRIRQHWAAVKIQAAFRGCLARRALRALKGLVKLQALVRGQIDRKRTAEWLKKVQALLRAQAQVSAGWTLQTPSSSAKLSSHLHGPATPEKFESPIRSKSMKYEHSPILKRNGSKSCVQINGNQEICWNRSESQVHEPSWNQGSSLIRAYSSNDERNDRILEIDSGKPHSTPKRRNLSFSNSNALGSDHYSKSLNSTKESTSLQSVQSPYCEVQSYSSQKINEVEESPFCTADNSPQYLSATSKDDGFRRSPFTPTKSDGSRSYLRGYSDYPSYMAYTESSKAKVRSLSAPKQRPQYERSTSSSNRYSLNGFDVSRLATHKASAMHTSFYNKAYPGSGRLDKLGMPVGYRY* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1507 453 Pfam Protein of unknown function (DUF4005) 337 412 IPR025064 -
Apr10g1507 453 PANTHER IQ-DOMAIN 5-RELATED 1 448 - -
Apr10g1507 453 Pfam IQ calmodulin-binding motif 108 128 IPR000048 GO:0005515
Apr10g1507 453 ProSiteProfiles IQ motif profile. 131 158 IPR000048 GO:0005515
Apr10g1507 453 PANTHER CALMODULIN BINDING PROTEIN IQD22 1 448 - -
Apr10g1507 453 MobiDBLite consensus disorder prediction 263 286 - -
Apr10g1507 453 Gene3D - 104 160 - -
Apr10g1507 453 MobiDBLite consensus disorder prediction 342 363 - -
Apr10g1507 453 MobiDBLite consensus disorder prediction 177 198 - -
Apr10g1507 453 MobiDBLite consensus disorder prediction 388 407 - -
Apr10g1507 453 ProSiteProfiles IQ motif profile. 107 135 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1507 Apr-Chr10 27519744 27523823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1507 1 453 IQD Protein Family AT4G23060 41.176 2.55e-74 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1507 - - gmx:100793587 640.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1507 10 27519744 27523823 Apr7g0612 7 12689149 12692738 PCT