Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1499 ATGGCGTCCTTGCACCACCCCACCGCTTCCCTCCAATCCAAACACACCTTAATCCCCCGAACCACCCTCACCCCAAAACCCATCTTCAACCTCTCCCTCCCCGGCTCCACCTTCACTCCCCTCAAGCTCAAACTCCCCATCGCTTTTCCCACCGCGCGCCGCTCCAACGGTCTCCTCGGAGCCAAAATGTCAGCCACCGCGGCCGCCAGCTACGCCTCCGCCCTTGCCGACGTGGCGAACTCCAACAACACCCTCGACGCGACCACCTCGGACATCGAGAAAATGGAGGAAATCTTCTCTGACTCCACGGTGTTCGACTTTTTCGCCGACCCAACAGTGGAAATCGAGAGGAAACGCAAGTTGGTGGACGAAATTGCGGAATCATCAGGGTTCCAACCCCACACGCGGAATTTCCTCTACATCTTGGTGGACGCGCAGAGGATTGACCTGGTGAATGACATAGCGAAGGAGTTCGAGTTGGTGTATAACTCTTTGACCGACACAGAGCTTGCTGTTGTGACCTCTGTGGTGAAGTTGGAATCGCAGCACTTGGCGCAGATTGCGAAGCAGGTGCAGAAGCTCACTGGGGCAAAGAATGTGAGGATTAAGACCCTGATTGACCCTAGTTTGGTTGCGGGTTTCACTATCAGGTATGGGAATTCGGGGTCTAAGTTGATTGACATGAGTGTGAGGAAGCAGCTTGAGGAGATTGCTGCTCAACTTGATTTGGCTGATGTTGAACTCGCCGTATGA 753 0.5445 MASLHHPTASLQSKHTLIPRTTLTPKPIFNLSLPGSTFTPLKLKLPIAFPTARRSNGLLGAKMSATAAASYASALADVANSNNTLDATTSDIEKMEEIFSDSTVFDFFADPTVEIERKRKLVDEIAESSGFQPHTRNFLYILVDAQRIDLVNDIAKEFELVYNSLTDTELAVVTSVVKLESQHLAQIAKQVQKLTGAKNVRIKTLIDPSLVAGFTIRYGNSGSKLIDMSVRKQLEEIAAQLDLADVELAV* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1499 250 Gene3D - 67 159 IPR026015 -
Apr10g1499 250 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 64 166 IPR026015 -
Apr10g1499 250 TIGRFAM ATP_synt_delta: ATP synthase F1, delta subunit 68 241 IPR000711 GO:0015986|GO:0046933
Apr10g1499 250 PRINTS ATP synthase delta subunit signature 67 86 IPR000711 GO:0015986|GO:0046933
Apr10g1499 250 PRINTS ATP synthase delta subunit signature 136 147 IPR000711 GO:0015986|GO:0046933
Apr10g1499 250 PRINTS ATP synthase delta subunit signature 147 161 IPR000711 GO:0015986|GO:0046933
Apr10g1499 250 PRINTS ATP synthase delta subunit signature 198 213 IPR000711 GO:0015986|GO:0046933
Apr10g1499 250 PRINTS ATP synthase delta subunit signature 216 234 IPR000711 GO:0015986|GO:0046933
Apr10g1499 250 PANTHER BNACNNG66500D PROTEIN 47 249 - -
Apr10g1499 250 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 200 219 IPR020781 GO:0015986|GO:0016020|GO:0046933
Apr10g1499 250 PANTHER ATP SYNTHASE DELTA CHAIN 47 249 IPR000711 GO:0015986|GO:0046933
Apr10g1499 250 Hamap ATP synthase subunit delta [atpD]. 63 243 IPR000711 GO:0015986|GO:0046933
Apr10g1499 250 Pfam ATP synthase delta (OSCP) subunit 68 241 IPR000711 GO:0015986|GO:0046933
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1499 1 249 Primary Pumps ATPases AT4G09650 58.594 2.90e-97 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1499 K02113 - gmx:100815063 368.237