Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1496 ATGGCCACCACCACCACCAGTCTTGGCGCCGCCGCCGGCGGAGACGACCGTGTCCTGGCGACGGCACAGCAGATCGTAAAGAGCCTCAGGACTGCGAAAGAGGATCGCGAAGACATGCTATTGATCTTCTCCACCTTCGATAACCGCCTCTCCGGCATCTCCGACCTCATCAACGGCGAGGATTCCAAGTCCTCCGATGACGAAGACCTCGACCGCTTCGAAGCCGCCGAGAAAGTCATCCTCACTGACGCTTACCTCTCCGGCGAACCTTCTCGCCAATCCGCATCACCCTTCAACCCTCCGAACAACCCCGCCGAGTACTTCTCCGCCGTCGACGAAATCATCCACTGGATGGAGCAATTCTCGATTGCGCCGCCGTCCGCCGCTGGAAGAACCGGCCAGATCATAGTTGACCGCGCCGAGAACGCGATTCAACTCGCGATGTCGAGGCTCGAGGAGGAGTTGCGCCACCTGTTGATTTGCAACACCATCCCTCTCGACGCCGTGAGCCGCTACGGTTCGATCAGGAGGGTTTCCCTTTCCTTCGGTTCTCACGACGGCGCAATCGATGAAAACCTTGAGAGCTTTGGCGAGGTCAGCGATCGCGGTTCTCATCGGTTCCACGAGCGCGGTGCGAGTTTGGGAGACGATTTGTTCGACGATTTGGTGCGTCCGGAAGCGGTGCAGGACCTCAGAGAAATCATCGATCGTATGGTTAGGTCTGGTTATGAAAGAGAGTGTCTTCAGGTTTATAGTAGTGTCCGTCGTGACGCTTTGGATGAGTGTTTGGTGATTCTTGGTGTTGAGAAACTGAGTATTGAAGAGGTTCAGAAGGTTGAGTGGAAGAGTTTGGATGAGAAGATGAAGAATTGGGTGCAAGCTGTTAAGGTTGTTGTTGGGGTGCTGTTGAGTGGGGAGAAGAGACTGTGTGATAGTCTTTTTGGTGAGTTGGATGAGTTGAAGGAGATATGTTTCAATGAAACTGCTAAAGGGTGTGTTATGCAGTTGTTGAATTTTGGTGAGGCTATTGCTATTTGTAAGAGGTCGCCGGAGAAGTTGTTCAGGATATTGGATATGTATGAGGCTCTGAGGGATGCGTTGCCTGATTTGCAGGATATGGTTTCTGATGAATTTCTGATTGGTGAGGCCAATGGAGTTCTGAGGGGACTTGGTGAGGCTGTCAAAGGGACGTTTGCTGAGTTTGAGAATTGTATTAGGAATGAGACTTCCAAGAAGCCAGTCATGAGTGGGGATGTTCATCCTTTGCTTAGGTATGTTATGAATTATCTAAAGTTGCTTGTGGATTATGGTGACCCTATGGATTCGCTTTTGGAAATCCGTGAAGAGGACCTGTATCGATTTCAAAACGATCTTGGTGGTGATGGTGCCCGGCTAGAGGCCATGTCCCCCTTAGCACGCCAAATTCTTTTGCTGATGTCTGAGCTCGAGTGTAATCTTGAGGAAAAATCGAGACTTTATGACGACAATGCAATGCAGCAGGTGTTTTTGATGAACAATCTCTATTACCTGGTTCGGAAAGTGAAGGACTCGGATCTTAGGAAGGTCTTGGGAGATGATTGGATTCGAAAACGCCGCGGTCAGATACGCCAGTGTGCTACTGGGTATCTCAGAGCAGCTTGGAGCAAGGCCTTATCTTGTTTGAAGGATGAAGGGATTGGAGGAGGGAGCTCTAACAATGCATCAAAGATGGCTTTGAAGGAGAGGTTCAAGAGTTTCAATGCATGTTTTGAGGAAATATACAGGGCCCAGACAGCTTGGAAGGTACCGGATGATCAGCTTCGGGAGGAGCTGCGGATATCCATATCGGAGAAGGTGATTCCTGCATACCGCTCGTTTGTGGGGAGGTTTAAGAGTCAGTTAGAGGGAAGGCATGCGGGGAAATATATTAAGTATACACCAGAGGATCTAGAGGCCTATCTATCAGATTTATTTGAAGGATCCCCTGCTGTATTGCATCACATAAGGAGAAAAAGTACATAG 2001 0.4983 MATTTTSLGAAAGGDDRVLATAQQIVKSLRTAKEDREDMLLIFSTFDNRLSGISDLINGEDSKSSDDEDLDRFEAAEKVILTDAYLSGEPSRQSASPFNPPNNPAEYFSAVDEIIHWMEQFSIAPPSAAGRTGQIIVDRAENAIQLAMSRLEEELRHLLICNTIPLDAVSRYGSIRRVSLSFGSHDGAIDENLESFGEVSDRGSHRFHERGASLGDDLFDDLVRPEAVQDLREIIDRMVRSGYERECLQVYSSVRRDALDECLVILGVEKLSIEEVQKVEWKSLDEKMKNWVQAVKVVVGVLLSGEKRLCDSLFGELDELKEICFNETAKGCVMQLLNFGEAIAICKRSPEKLFRILDMYEALRDALPDLQDMVSDEFLIGEANGVLRGLGEAVKGTFAEFENCIRNETSKKPVMSGDVHPLLRYVMNYLKLLVDYGDPMDSLLEIREEDLYRFQNDLGGDGARLEAMSPLARQILLLMSELECNLEEKSRLYDDNAMQQVFLMNNLYYLVRKVKDSDLRKVLGDDWIRKRRGQIRQCATGYLRAAWSKALSCLKDEGIGGGSSNNASKMALKERFKSFNACFEEIYRAQTAWKVPDDQLREELRISISEKVIPAYRSFVGRFKSQLEGRHAGKYIKYTPEDLEAYLSDLFEGSPAVLHHIRRKST* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1496 666 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 56 665 - -
Apr10g1496 666 PANTHER EXOCYST COMPLEX PROTEIN EXO70 56 665 IPR004140 GO:0000145|GO:0006887
Apr10g1496 666 Pfam Exo70 exocyst complex subunit 289 649 IPR046364 GO:0000145|GO:0005546|GO:0006887
Apr10g1496 666 Gene3D Exocyst complex component Exo70 98 658 - -
Apr10g1496 666 Coils Coil 137 157 - -
Apr10g1496 666 SUPERFAMILY Cullin repeat-like 101 652 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1496 Apr-Chr10 27397692 27401133 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1496 16 665 EXO70 exocyst subunit family AT5G50380 59.970 0.0 771
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1496 K07195 - gmx:100809716 1130.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0340 1 4117773 4123706 Apr10g1496 10 27397692 27401133 PCT