Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1476 ATGTCCCCAACTCTTTATAGTGCCTTCAAAGGTGAAATCGATGGGGAAAATCTTTATATTGTTGATATCCCCACAATGGATCACTATGCCTATTGTCCCCATCAACATGTTTTGGAGAGTAGCACCCCAACTTTGTTCATTCCCTTATGCGATGAAACCACGAGGAATAATAAGAGGAAGAGAACCGTGGAAATTCCCTTTTGGTTGGGAAGCTTTAACACCCATTCAAGCCTCAACACTAATAGCAGTAGGAACAGCACGAAAAAGCATTTCAGAGATCACATACAGACTTATACACAAAGATATCTTGCAGCTGAAGGTGTTGAAGAGGGATCAGAAGATATGAACATTTCTGAGAGTGAAGAAGATGGGTGTGCTGATGGAATGAGGCTTGTTCAACTTCTAATTGCATGTGCTGAAGCAGTGGCATGTCGTGACAAATCACACGCTTCGATATTACTATCTGAACTCAAAGCCAATGCTTTGGTTTTCGGGTCTTCATTCCAAAGGGTCGCTTCTTGTTTCGTGCAAGGCCTGGCTGAGAGGCTCACTTTGATCCAACCTATTGGGCCTGTGGGGGTGATGCAGCCTATGATGAACATCATGGACGCAGCTTCTGAAGAAAAGGAAGAAGCGTTTAGGTTGGTTTATGAAACATGTCCGCACATTCAGTTTGGACACTTTGTGGCTAATGCCACAGTATTGGAAGCCTTTGAGGGTGAGAGTTTCGTTCATGTGGTTGACTTAGGTATGAGCCTTGGTCTTAAACATGGGCACCAGTGGAGGGGACTTATCCAAAGCCTAGCAAACCGTGCTGGTCAACGTGTACGTTGCCTAAGAATCACAGGTGTAGGACTTTGTGAGAGACTCAAAACCATCGGTGAGGAACTCTCGGTTTATGCAAATAACTTGGGCATTAACTTGGAGTTCCAAGTGGTGCAAAAGAATTTAGAAAGTTTGCAGCCTGAGGATATAAAAGTGAGAGAGGAAGAGGTTCTTGTGGTGAATAGCATTCTTCAGCTGCATTGTGTGGTGAAAGAGAGTCGTGGGGCTTTGAACTCTGTCTTGCAGATGGTTCATGGGCTTTCACCAAAAGTGTTGGTGATGGTGGAGCAAGATTCGAGTCATAATGGACCCTTTTTTCTTGGAAGGTTTATGGAGTCATTGCACTATTACTCAGCTATTTTTGACTCATTGGATGTTATGTTGCCAAAATATGACACTAAGAGGGCAAAGATGGAGCAGTTTTACTTTGCTGAGGAGATAAAGAACATTGTGAGTTGTGAGGGGCCATTGAGGATGGAGAGGCACGAGAGAGTGGACCAGTGGCGTAGGAGAATGAGTAGGGCTGGGTTTCAGGCTGCACCTATTAAGATGGTGGCTCAGGCTAAGCAGTGGCTAACCAAGAACAAGGTTTGTGATGGGTATACGGTTGTGGAAGAGAAAGGGTGCTTGGTGCTTGGCTGGAAGTCAAAGCCTATTGTTGCAGTTTCCTGTTGGAAATGCTGA 1509 0.4473 MSPTLYSAFKGEIDGENLYIVDIPTMDHYAYCPHQHVLESSTPTLFIPLCDETTRNNKRKRTVEIPFWLGSFNTHSSLNTNSSRNSTKKHFRDHIQTYTQRYLAAEGVEEGSEDMNISESEEDGCADGMRLVQLLIACAEAVACRDKSHASILLSELKANALVFGSSFQRVASCFVQGLAERLTLIQPIGPVGVMQPMMNIMDAASEEKEEAFRLVYETCPHIQFGHFVANATVLEAFEGESFVHVVDLGMSLGLKHGHQWRGLIQSLANRAGQRVRCLRITGVGLCERLKTIGEELSVYANNLGINLEFQVVQKNLESLQPEDIKVREEEVLVVNSILQLHCVVKESRGALNSVLQMVHGLSPKVLVMVEQDSSHNGPFFLGRFMESLHYYSAIFDSLDVMLPKYDTKRAKMEQFYFAEEIKNIVSCEGPLRMERHERVDQWRRRMSRAGFQAAPIKMVAQAKQWLTKNKVCDGYTVVEEKGCLVLGWKSKPIVAVSCWKC* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1476 502 ProSiteProfiles GRAS family profile. 122 501 IPR005202 -
Apr10g1476 502 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 35 501 IPR005202 -
Apr10g1476 502 Pfam GRAS domain family 131 501 IPR005202 -
Apr10g1476 502 PANTHER DELLA PROTEIN RGL1-LIKE 35 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1476 Apr-Chr10 27172873 27174381 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1476 123 502 GRAS Transcription Factor Family AT1G66350 37.143 3.77e-76 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Apr10g1476 GRAS 1.3e-110 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1476 - - gmx:100815959 798.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1476 10 27172873 27174381 Apr10g1476 10 27172873 27174381 ECH