Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1465 ATGGCATCGAGCGAGGGGTTTCTGACGGATGGGCAGAGGGAAATGCTAAAAATTGCGAGTCAAAATGCGGAGAATCTGTCTTCATCGCCGAAGTCCCCGTCGTCTCTGCTTTCTGACCATCATGTGAAAGCCCCTCCTGGTGGTAGGGCACAAACTGCTGGGATTGCTGTGAGGCATGTGCGCCGTTCACACTCTGGGAAGTTTGTGCGGGTGAAGAAGGATGGTGCTGGTGGTAAGGGCACTTGGGGAAAGTTGCTTGATACAGACGTTGAATCTCACATAGATCGGAATGATCCAAATTATGACAGTGGCGATGAACCCTATCAGCTGGTTGGATCTACTGTTACTGATCCCTTAGATGAATTCAAGAAAGCAGTGGTATCCATCATAGAGGAATATTTCAGCAATGGGGATGTGGAATTGACAGCATCTGACCTCAGAGAACTTGGTTCAAGTGAATACTATCCATACTTCATTAAACGCCTTGTGTCCATGGCAATGGACAGGCATGATAAGGAGAAAGAAATGGCTTCTGTTCTGCTTTCAGCATTGTATGCTGATGTCATCAGCCCTGCACAGATTAGGGATGGGTTTTTTATGCTTCTTGAATCTGCTGATGATCTTGCAGTGGATATACTGGATGCAGTTGACATCCTTGCTTTATTCCTGGCTCGGGCTGTTGTTGATGATATTATTCCTCCAGCCTTTCTTGCCAGGGCAAGGAGGGCTCTTCCAGAATCTTCCAAGGGGGTTCAGGTTATCCAGACTGCTGAGAAGAGTTATCTATCAGCTCCACACCATGCAGAACTTGTGGAAAGGCGATGGGGTGGTAGCACTCACATTACTGTTGAAGAAGTAAAGAAGAAGATTGCTGATTTGCTTAGAGAGTATGTGGATAGTGGTGATACATTTGAAGCCTGTAGGTGTATACGTGAGTTAGGGGTTTCATTCTTCCATCATGAGGTTGTAAAGAGGGCTTTGGTACTTGCCATGGAGATTCGTTTAGCAGAATCTCTAATGTTGAAGTTATTAAAAGAAGCAGCAGAAGAAGGACTTGTTAGTTCCAGTCAAATGGTGAAAGGGTTTTCTCGATTGGCAGAATCCCTAGATGATCTTGCTCTTGATATTCCCTCAGCTAAATCCTTGTTTCAGACATTTGTCCCCAAGGCAATATCTGAAGGATGGCTTGATGCTTCATTTACTAAACCTGCTGGTGAAGATGGGGAAATCCAAGTTGAAGATGAAAAGGTGAGGAAATACAAAAAAGAAGCTGTAACTATTATTCATGAGTATTTTCTTTCTGACGACATTCCTGAACTCATTCGAAGTCTTGAAGATCTTGGAGCACCCGAGTATAACCCAATATTTTTGAAAAAGCTAATAACACTTGCTATGGACCGAAAGAACAGAGAAAAGGAAATGGCATCTGTACTGCTATCTGCTCTTCATATAGAGCTCTTCTCTACAGAGGATATAGTTAATGGTTTTGTCTTGCTTCTGGAAAGTGCAGAAGATACAGCACTGGATATATTGGATGCTTCAAATGAGCTTGCTCTTTTTTTAGCACGGGCTGTGATTGATGATGTATTAGCCCCACTGAACTTGGAAGAAATTGGCAGCAGGTTACCACCAAAATGCAGTGGTAGTGAAACTGTGCGTATGGCTCGAACACTCATTGCTGCTCGTCATGCTGGTGAGAGGCTGTTGAGATGCTGGGGCGGAGGAACTGGATGGGCGGTGGAGGATGCCAAGGACAAGATAATGAAGCTCTTGGAGGAGTATGAAAGTGGTGGGGTTGTCAGTGAAGCATGCCAGTGTATCCGTGACCTGGGAATGCCTTTTTTTAACCATGAGGTAGTGAAGAAAGCTTTGATTATGGCCATGGAGAAGAAGAATGATCGGATGCTACATCTGCTGCAGGAGTGCTTTAGTGAGGGCCTCATCACGATCAATCAGATGACTAAAGGTTTCACCCGAATTAAGGATGGCCTCGATGATCTGGCTCTGGACATTCCAAACGCTAAGGAGAAATTTGGCTTCTATGTGGAGCATGCCCAGGCCAAAGGCTGGCTTCTACCATCATTTGATTCGTCTGCCTCAGATGTCTAA 2109 0.4486 MASSEGFLTDGQREMLKIASQNAENLSSSPKSPSSLLSDHHVKAPPGGRAQTAGIAVRHVRRSHSGKFVRVKKDGAGGKGTWGKLLDTDVESHIDRNDPNYDSGDEPYQLVGSTVTDPLDEFKKAVVSIIEEYFSNGDVELTASDLRELGSSEYYPYFIKRLVSMAMDRHDKEKEMASVLLSALYADVISPAQIRDGFFMLLESADDLAVDILDAVDILALFLARAVVDDIIPPAFLARARRALPESSKGVQVIQTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKIADLLREYVDSGDTFEACRCIRELGVSFFHHEVVKRALVLAMEIRLAESLMLKLLKEAAEEGLVSSSQMVKGFSRLAESLDDLALDIPSAKSLFQTFVPKAISEGWLDASFTKPAGEDGEIQVEDEKVRKYKKEAVTIIHEYFLSDDIPELIRSLEDLGAPEYNPIFLKKLITLAMDRKNREKEMASVLLSALHIELFSTEDIVNGFVLLLESAEDTALDILDASNELALFLARAVIDDVLAPLNLEEIGSRLPPKCSGSETVRMARTLIAARHAGERLLRCWGGGTGWAVEDAKDKIMKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALIMAMEKKNDRMLHLLQECFSEGLITINQMTKGFTRIKDGLDDLALDIPNAKEKFGFYVEHAQAKGWLLPSFDSSASDV* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1465 702 Gene3D - 114 262 - -
Apr10g1465 702 Gene3D - 409 562 - -
Apr10g1465 702 ProSiteProfiles MI domain profile. 285 406 IPR003891 -
Apr10g1465 702 PANTHER PROGRAMMED CELL DEATH 4 1 694 IPR039778 GO:0045892
Apr10g1465 702 Pfam MA3 domain 584 691 IPR003891 -
Apr10g1465 702 Pfam MA3 domain 421 530 IPR003891 -
Apr10g1465 702 Pfam MA3 domain 286 397 IPR003891 -
Apr10g1465 702 Pfam MA3 domain 122 233 IPR003891 -
Apr10g1465 702 MobiDBLite consensus disorder prediction 15 36 - -
Apr10g1465 702 Gene3D - 570 699 - -
Apr10g1465 702 Gene3D - 272 404 - -
Apr10g1465 702 ProSiteProfiles MI domain profile. 419 540 IPR003891 -
Apr10g1465 702 PANTHER PROGRAMMED CELL DEATH PROTEIN 4-LIKE 1 694 - -
Apr10g1465 702 ProSiteProfiles MI domain profile. 121 242 IPR003891 -
Apr10g1465 702 SMART ma3_7 122 233 IPR003891 -
Apr10g1465 702 SMART ma3_7 583 692 IPR003891 -
Apr10g1465 702 SMART ma3_7 420 531 IPR003891 -
Apr10g1465 702 SMART ma3_7 286 397 IPR003891 -
Apr10g1465 702 MobiDBLite consensus disorder prediction 1 53 - -
Apr10g1465 702 SUPERFAMILY ARM repeat 417 576 IPR016024 -
Apr10g1465 702 SUPERFAMILY ARM repeat 119 279 IPR016024 -
Apr10g1465 702 SUPERFAMILY ARM repeat 579 697 IPR016024 -
Apr10g1465 702 ProSiteProfiles MI domain profile. 582 701 IPR003891 -
Apr10g1465 702 SUPERFAMILY ARM repeat 282 403 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1465 Apr-Chr10 27088518 27093379 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1465 586 682 Eukaryotic Initiation Factors Gene Family AT5G57870 33.000 7.97e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1465 - - gmx:100809081 1263.06