Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1462 ATGGGTCCCCGAACCATATCCATCGACTACCAAACCACCCGGGCCTTACCCGAACCCGATGTCTTCATTCACACTTCCAACGGAACACGAATTCCGGCCCACGCTGGCATTCTGGCTTCGGTGTCGCCGGTATTGGAGAACTTCATAGATCGGCCACGTAAGCATCGGAGCTCCGAAAGAATAATCCAAATCCACGGCGTTCCCTGCGACGCCGTCACCGCCTTCGTCGGTTTCCTTTACTCCTCCAGGTGCACGGAGGACGAGATGGACAAGTACGGGATGCACCTGCTGGCATTGTCGCACGTTTACATGGTGCCGCAGCTGAAGCAGAGGTGCATCAAGGGTTTGACTCAGCGGTTGACCACGGACAACGTGGTGGACGTGCTGCAACTGGCCAGGCTCTGCGACGCACCGGATCTTTACCTCCGCTGCATGAAGCTGCTCACCAATCATTTTAAGGCGGTGGAGAAAACCGAAGGGTGGAAGTTTCTCGTCAAGCACGATCCCTGGCTCGAACTCGACATTCTTCGTTTCATGGACGAACACGAAACGAGGAAAAGGCGATCGAGGAGGCACAGGGAGGAGCAGGGTTTGTATGCGCAACTAAGCGAGGCGATGGAGTGCTTGGAACACATATGCACGGAGGGGTGCACTGATGTTGGACCCTACGATGTGGAGGTGAAGGGAGAGAGGAGGCCGTGCGGCAAATTCGCCACGTGTCAAGGTCTTCAGGTTCTGATACGCCACTTTGCCACGTGCGAGAGGAGGATGAGCGGTGGCTGCTTGCGGTGCAAGCGAATGTGGCAGCTCTTTAGACTTCATTCCTATATTTGTCAGCAGCCTGATTCCTGCAAGGTTCCTCTTTGCAGGCAATTTCAATTGAGAATGCAGCAAGAGAAAAGGAGAGATGATACAAGGTGGATGCTACTAGCTAGGAAGGTGGCTTCAGCAAAAGTCATGTCTTCTTTGTCTCTGCCAAAGAGGAAGCGAGATGAGGAAACAAGAGTGACAATAAACAATTCTGGGATTAGAAGTTTCAAATTACTATGA 1050 0.5286 MGPRTISIDYQTTRALPEPDVFIHTSNGTRIPAHAGILASVSPVLENFIDRPRKHRSSERIIQIHGVPCDAVTAFVGFLYSSRCTEDEMDKYGMHLLALSHVYMVPQLKQRCIKGLTQRLTTDNVVDVLQLARLCDAPDLYLRCMKLLTNHFKAVEKTEGWKFLVKHDPWLELDILRFMDEHETRKRRSRRHREEQGLYAQLSEAMECLEHICTEGCTDVGPYDVEVKGERRPCGKFATCQGLQVLIRHFATCERRMSGGCLRCKRMWQLFRLHSYICQQPDSCKVPLCRQFQLRMQQEKRRDDTRWMLLARKVASAKVMSSLSLPKRKRDEETRVTINNSGIRSFKLL* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1462 349 CDD BACK 121 168 - -
Apr10g1462 349 Gene3D - 121 191 - -
Apr10g1462 349 SUPERFAMILY POZ domain 20 119 IPR011333 -
Apr10g1462 349 Gene3D TAZ domain 192 318 IPR035898 -
Apr10g1462 349 SUPERFAMILY TAZ domain 194 293 IPR035898 -
Apr10g1462 349 Pfam BTB/POZ domain 19 119 IPR000210 GO:0005515
Apr10g1462 349 ProSiteProfiles BTB domain profile. 19 88 IPR000210 GO:0005515
Apr10g1462 349 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 1 347 IPR044513 -
Apr10g1462 349 PANTHER BTB/POZ AND TAZ DOMAIN PROTEIN 1 347 - -
Apr10g1462 349 SMART TAZ_2 196 290 IPR000197 -
Apr10g1462 349 Pfam TAZ zinc finger 203 289 IPR000197 -
Apr10g1462 349 SMART BTB_4 19 120 IPR000210 GO:0005515
Apr10g1462 349 Gene3D Potassium Channel Kv1.1; Chain A 17 120 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1462 Apr-Chr10 27026844 27030961 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Apr10g1462 BTB 2e-11 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1462 - - gmx:100807120 590.882