Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1458 ATGGCTTTAAATTCTGGTTGCAGTTTGCTAGTGATGGCACTTATTTTTGGTAGCTCCTCTTATGTCTTGTTCCTACAACCTGTTATTGCTACCAGCATGCCACCTTCTAATTCCTCATCCATAAATCAGGAACTTCAGGCTTTACTCCAGAGTGGTTGGTGCAATGATCATCTAAATATTTCAAATCACTGTGATTGGAATGGTATCATATGCAATGAAGATGGAAGTGTTACGAATATTGATGCATGGGCATTCAATATTCCTCAGTCAGAAGAATTGCTGCAGATTAAGAACTTGAATGTAACTGCATTCACCAATTTAGTTCGTCTTGATCTCTATGCACTGGAACTCACAGGAACTATCCCTATGGAAATAGGTACACTTACAAAGTTTACTCATCTTGACCTCTCTAACAATCATATTCATGGTAGGATACCTAAAGAACTCTTAAATCTCACTCAACTTGAGAAGCTTGATCTTTCATGCAATTCTCTTGGTGGTGTTATCCCTTCTGCTTTTGATCAATTGGAGAATTTGACCTATCTCGGCCTTCGTTCTAACCAAATTCAAGTTCAATCCCGTATACTTTTGGTCAAGAGTTTTCGCAATGAGGTCAAGATGTTAACCAAAATTCGAAATAGAAACATTGTAAAGCTTCATGGATTTTGCCTTCACAAGCGATGCATGTTTCTTGTCTATCAATACATGGAAAATGGTAGCTTATTTTATGCCTTGAACAATGATGTGGAAGCTGCAGAGTTGAACTGGAGTAAGAGGGTAAACATCATCAGAGGAATGGCACATGCTTTGTCCTACATGCATCATGATTGTACCCCACCAATTGTTCATCGAGATGTAACAAGTAGCAATATTTTGTTGAACTCACAATTGGAGGCTTTTATCTCAGATTTTGGCACAGCTAGACTCCTTGATCCTGATTCTTCAAATAATACTTTGGTAGTTGGCACGTATGGATATATTGCTCCAGAACTTGCTTACACATTGACTGTGACAGAAAAATGTGATGTTTATAGTTTTGGAGTGGTGGCATTAGAAACATTAATATCAAACTTGTCCACTCAAAGCAAATTGTTGAAAGATCTTGTGGATTCACGTGTTCCTCTTCCTTCAAATCCAAAAATTGCTAAAGATATAGTTATTGTGATAATGCTAGCATTGGCATGTGTGAATTCTAAACCAAACTCTAGACCATCTATGCAACAAGTGGTTCATGAACTCCACGGTTCCAAATTGCCACTATGTTTGCCTTTATCTGAAATTTCAATCCACCACATCATGACTCGAGATATATCTTCTTCATGTGTTACAGGACCAAAATAA 1341 0.3766 MALNSGCSLLVMALIFGSSSYVLFLQPVIATSMPPSNSSSINQELQALLQSGWCNDHLNISNHCDWNGIICNEDGSVTNIDAWAFNIPQSEELLQIKNLNVTAFTNLVRLDLYALELTGTIPMEIGTLTKFTHLDLSNNHIHGRIPKELLNLTQLEKLDLSCNSLGGVIPSAFDQLENLTYLGLRSNQIQVQSRILLVKSFRNEVKMLTKIRNRNIVKLHGFCLHKRCMFLVYQYMENGSLFYALNNDVEAAELNWSKRVNIIRGMAHALSYMHHDCTPPIVHRDVTSSNILLNSQLEAFISDFGTARLLDPDSSNNTLVVGTYGYIAPELAYTLTVTEKCDVYSFGVVALETLISNLSTQSKLLKDLVDSRVPLPSNPKIAKDIVIVIMLALACVNSKPNSRPSMQQVVHELHGSKLPLCLPLSEISIHHIMTRDISSSCVTGPK* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1458 446 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 39 194 - -
Apr10g1458 446 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 197 438 - -
Apr10g1458 446 SUPERFAMILY Protein kinase-like (PK-like) 197 413 IPR011009 -
Apr10g1458 446 Gene3D Ribonuclease Inhibitor 37 201 IPR032675 -
Apr10g1458 446 ProSiteProfiles Protein kinase domain profile. 155 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1458 446 ProSitePatterns Tyrosine protein kinases specific active-site signature. 281 293 IPR008266 GO:0004672|GO:0006468
Apr10g1458 446 Pfam Protein tyrosine and serine/threonine kinase 199 413 IPR001245 GO:0004672|GO:0006468
Apr10g1458 446 Pfam Leucine rich repeat 132 189 IPR001611 GO:0005515
Apr10g1458 446 Gene3D Transferase(Phosphotransferase) domain 1 202 416 - -
Apr10g1458 446 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 197 438 - -
Apr10g1458 446 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 39 194 - -
Apr10g1458 446 SUPERFAMILY L domain-like 101 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1458 Apr-Chr10 26991724 26993241 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1458 199 329 Receptor kinase-like Gene Family AT4G08850 63.359 2.16e-52 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Apr10g1458 PK_Tyr_Ser-Thr 3e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1458 - - aprc:113851127 890.567