Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr10g1457 | ATGGGCAGTTTAGTGGCAGTGACACTTTTCTCTGCCATGCTAATGCCCACTTGCACCGCACTTTCCAGTATAAATGAAGAAAAACAAGCTCTGCTCCAAACGGGTTGGTGGAGTCATCACCCAAATGTCTCTGACCATTGTGATTGGGAAGGTATCAGATGCAATGAAGATGGAAGCGTTGTTTATATATCCGGATGGGAATTAATTAATGAGTATCTGTTATCAGAAGAAATGCTGGAGATTGGGAAGTTGAACGTCACTGCCTTCTCGAATTTAGTGATTCTAGATCTAAATGGAATGGGACTAGGAGGAAGCATCCCTAAAGAAATAACCACACGTATAATGCTTGAAGATCTTGACCTGTCCAACAATCGCCTTCGTGGTCCTATACCCCTCCAACTTGCCAATTTCACACGTTTGAAGATGTTGTCTCTCCATAGTAATTCCCTTTCCGGTTCAATCCCTTCTACAGTGGGTCAATTGAAGAATTTAACCTATCTCTACCTTGAGTCAAACCAATTTCAAGGTCCTATTCCAATGGAACTGGGGAATCTGACACAATTGAAACAATTAGGTCTCTCACATAATTCACTTTCCGGTTCAATCCCTTCCACATTGGGTCAATTGAAGAATTTAACCTATCTCTACCTTGATTCAAACCAATTTGACGGTCCCATACCAATGGAACTGGGGAATCTGACACAATTGAAAGAATTAGATCTCTCACATAATTCACTTTCCGGTTCAATCCCTTCCACGTTGGGTCAATTGAAGAATTTAACCTATCTCTACCTTCCTTCAAACCAATTTGAAAGTCCTATTCCAATGGAACTGGGGAATCTGACACAATTGAAAGTATTATATCTCTCACATAATTCACTTTCCGGTTCAATCCCTTCCACGTTGGGTCAATTGAAGAATTTAATCTCTCTCTATCTTCATTCAAACCAATTTGAAGGTCCTATTCCAATGGAACTGGGGAATCTGACACAATTGGAAGTATTATATCTCTCACATAATTCACTTTCCAGTTCAATCCCTTCCACGTTGGGTCAATTGAAGAATTTAAAGCATCTCTATCTTGATTCAAACCAATTTCAAGGTCCTATTTCAATGGAACTGGGGAATCTGACACAATTGAAACAATTAGATCTCTCACATAATTCACTTTCCGGTTCAATCCCTTCCACGTTGGGTCAATGGAAGAATTTAATCTATCTCTATCTTCATTCAAACCAATTTGAAGGTCCCATACCAATAGAAGTAGTGAACTTGACACTTTTACAACACTTACATCTTTCCCACAACCACCTCACCAGCTCTATCCCATCTCCTATCCTGAATTGTCCACTTGCAACAGTGGATTTAAGCTGTAACTTGTTAAATGGAAGCATCACTTCCCAAATTGGTTGTGTCACTGACCTTAACCTTAGTCATAATTTTTTCAGCGGCCAGGTTCCATCTGTTTTTGGAACAAATTCTATGATGGATAGGTTGGATCTTAGTTATAATAATCTGACTGGTAAGTTACATACGGAACTTGCGAATTTAGGATATATAAATCTTTCATACAATTTTTTTGACTTTCCAGAAAACCTTGACTCAGAATCTAAATTACCGGACTTCTGTTCTTTCCCAAAAAATGCACTTATCACTTACGACCCACCTAATTACGCAGCTTGTTATGTCCTCCAAACCAATTCTCACTCTAGTACAACAACTAGTAAAGTAAAGACTATCATTGTAATTGCTCTTCCTATCACTTGCATCATTCTTTCTGTACTTGCAACATTATATTTCCCAAAGTGTATGAATAAGGCCAAATTTGAAGGAAGATCAACAAAGAATGGAGACTTCTTTTCTATATGGAACTATGACGGTAAAATTGCATTTGAAGACGTCATTGAAGCAACTGAGGACTTTCACCTCAAGTACTGCATTGGAACTGGTGCATATGGTAGTGTCTATAAAGCACAATTGCCTAGCGGTAACATTGTTGCATTGAAGAAACTTCACCAAATGGAATCTCAAAATCCAGCTTTTGACAAGAGTTTTCGCAATGAGGTCAAGATGTTAACTGGAATACGCCACAAAAACATTGTGAAGCTTCATGGATATTGCCTTCACAATCGTAGCATGTTTCTTGTCTACCAATACATGGAAAGAGGTAGCTTATTTTATGTCTTGAACAACGATGTGGAAGCTGAGGAGTTGAATTGGAGTATGAGGGTGAATATCATTAAAGGAATGGCACATGCTTTGTCCTACATGCATCATGATTGTACCCCACCAATTGTTCATCGTGATGTAACAACTAGCAATGTTTTATTGAACTCACAATTGGAGGCTTTTGTTTCAGACTTTGGCACTGCTAGACTCCTTGATCCTCATTCCTCCAATCAAACCTTAGTAGTCGGCACTTATGGCTATGTTGACCCAGAGCTTGCATACACATTGAAGGTGACAGAAAAATGTGATGTTTACAGTTTTGGAGTTGTGGCTTTGGAAACATTAATGGGAAGGCATCCAGGAGAGCTACTCTCATCTTTATCAAACCCATCTAATCAAAACTTCCTGTTGAAGGATATCTTGGATTCACGTCTTCCCCTTCCTTCCAGTCAAAAAGATGCTCAAGATATTGTACTTGTGGGGACAATAGCATTAGCATGTTTGTGTTCCAAACCAAAGTTCAGACCATCAATGCAACAAGTGGCTAGGAAACTCTCTTGTTCCAAATTGTCATTGCCTTTGCCTTTGTATGAGATTTCAATCCATCTCTTAATGTCTCAAGAAATATGA | 2799 | 0.3894 | MGSLVAVTLFSAMLMPTCTALSSINEEKQALLQTGWWSHHPNVSDHCDWEGIRCNEDGSVVYISGWELINEYLLSEEMLEIGKLNVTAFSNLVILDLNGMGLGGSIPKEITTRIMLEDLDLSNNRLRGPIPLQLANFTRLKMLSLHSNSLSGSIPSTVGQLKNLTYLYLESNQFQGPIPMELGNLTQLKQLGLSHNSLSGSIPSTLGQLKNLTYLYLDSNQFDGPIPMELGNLTQLKELDLSHNSLSGSIPSTLGQLKNLTYLYLPSNQFESPIPMELGNLTQLKVLYLSHNSLSGSIPSTLGQLKNLISLYLHSNQFEGPIPMELGNLTQLEVLYLSHNSLSSSIPSTLGQLKNLKHLYLDSNQFQGPISMELGNLTQLKQLDLSHNSLSGSIPSTLGQWKNLIYLYLHSNQFEGPIPIEVVNLTLLQHLHLSHNHLTSSIPSPILNCPLATVDLSCNLLNGSITSQIGCVTDLNLSHNFFSGQVPSVFGTNSMMDRLDLSYNNLTGKLHTELANLGYINLSYNFFDFPENLDSESKLPDFCSFPKNALITYDPPNYAACYVLQTNSHSSTTTSKVKTIIVIALPITCIILSVLATLYFPKCMNKAKFEGRSTKNGDFFSIWNYDGKIAFEDVIEATEDFHLKYCIGTGAYGSVYKAQLPSGNIVALKKLHQMESQNPAFDKSFRNEVKMLTGIRHKNIVKLHGYCLHNRSMFLVYQYMERGSLFYVLNNDVEAEELNWSMRVNIIKGMAHALSYMHHDCTPPIVHRDVTTSNVLLNSQLEAFVSDFGTARLLDPHSSNQTLVVGTYGYVDPELAYTLKVTEKCDVYSFGVVALETLMGRHPGELLSSLSNPSNQNFLLKDILDSRLPLPSSQKDAQDIVLVGTIALACLCSKPKFRPSMQQVARKLSCSKLSLPLPLYEISIHLLMSQEI* | 933 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr10g1457 | 932 | Pfam | Leucine rich repeat | 232 | 270 | IPR001611 | GO:0005515 | |
Apr10g1457 | 932 | Pfam | Leucine rich repeat | 116 | 174 | IPR001611 | GO:0005515 | |
Apr10g1457 | 932 | Pfam | Leucine rich repeat | 379 | 438 | IPR001611 | GO:0005515 | |
Apr10g1457 | 932 | Gene3D | Phosphorylase Kinase; domain 1 | 604 | 719 | - | - | |
Apr10g1457 | 932 | PANTHER | FLAGELLIN-SENSING-LIKE PROTEIN | 273 | 926 | - | - | |
Apr10g1457 | 932 | PANTHER | FLAGELLIN-SENSING-LIKE PROTEIN | 27 | 404 | - | - | |
Apr10g1457 | 932 | PRINTS | Leucine-rich repeat signature | 236 | 249 | - | - | |
Apr10g1457 | 932 | PRINTS | Leucine-rich repeat signature | 377 | 390 | - | - | |
Apr10g1457 | 932 | SMART | LRR_typ_2 | 425 | 449 | IPR003591 | - | |
Apr10g1457 | 932 | SMART | LRR_typ_2 | 281 | 305 | IPR003591 | - | |
Apr10g1457 | 932 | SMART | LRR_typ_2 | 137 | 161 | IPR003591 | - | |
Apr10g1457 | 932 | SMART | LRR_typ_2 | 377 | 401 | IPR003591 | - | |
Apr10g1457 | 932 | SMART | LRR_typ_2 | 185 | 209 | IPR003591 | - | |
Apr10g1457 | 932 | SMART | LRR_typ_2 | 329 | 353 | IPR003591 | - | |
Apr10g1457 | 932 | SMART | LRR_typ_2 | 233 | 257 | IPR003591 | - | |
Apr10g1457 | 932 | Pfam | Leucine Rich repeats (2 copies) | 330 | 368 | IPR025875 | - | |
Apr10g1457 | 932 | Pfam | Leucine Rich repeats (2 copies) | 282 | 317 | IPR025875 | - | |
Apr10g1457 | 932 | Gene3D | Ribonuclease Inhibitor | 20 | 178 | IPR032675 | - | |
Apr10g1457 | 932 | Gene3D | Ribonuclease Inhibitor | 280 | 549 | IPR032675 | - | |
Apr10g1457 | 932 | SMART | LRR_sd22_2 | 233 | 248 | - | - | |
Apr10g1457 | 932 | SMART | LRR_sd22_2 | 377 | 392 | - | - | |
Apr10g1457 | 932 | SMART | LRR_sd22_2 | 329 | 358 | - | - | |
Apr10g1457 | 932 | SMART | LRR_sd22_2 | 281 | 310 | - | - | |
Apr10g1457 | 932 | SMART | LRR_sd22_2 | 257 | 278 | - | - | |
Apr10g1457 | 932 | SMART | LRR_sd22_2 | 161 | 187 | - | - | |
Apr10g1457 | 932 | Pfam | Protein kinase domain | 642 | 905 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr10g1457 | 932 | SUPERFAMILY | Protein kinase-like (PK-like) | 624 | 908 | IPR011009 | - | |
Apr10g1457 | 932 | PANTHER | LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED | 273 | 926 | - | - | |
Apr10g1457 | 932 | PANTHER | LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED | 27 | 404 | - | - | |
Apr10g1457 | 932 | SUPERFAMILY | L domain-like | 45 | 368 | - | - | |
Apr10g1457 | 932 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 765 | 777 | IPR008266 | GO:0004672|GO:0006468 | |
Apr10g1457 | 932 | ProSiteProfiles | Leucine-rich repeat profile. | 235 | 257 | IPR001611 | GO:0005515 | |
Apr10g1457 | 932 | Gene3D | Transferase(Phosphotransferase) domain 1 | 720 | 914 | - | - | |
Apr10g1457 | 932 | SUPERFAMILY | L domain-like | 305 | 527 | - | - | |
Apr10g1457 | 932 | Gene3D | Ribonuclease Inhibitor | 179 | 277 | IPR032675 | - | |
Apr10g1457 | 932 | ProSiteProfiles | Protein kinase domain profile. | 641 | 920 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr10g1457 | 932 | ProSitePatterns | Protein kinases ATP-binding region signature. | 647 | 669 | IPR017441 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr10g1457 | Apr-Chr10 | 26984187 | 26987508 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr10g1457 | 5 | 813 | Receptor kinase-like Gene Family | AT4G08850 | 36.043 | 5.03e-163 | 502 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Apr10g1457 | Pkinase | 7.6e-43 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr10g1457 | - | - | aprc:113851126 | 1814.66 |