Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1457 ATGGGCAGTTTAGTGGCAGTGACACTTTTCTCTGCCATGCTAATGCCCACTTGCACCGCACTTTCCAGTATAAATGAAGAAAAACAAGCTCTGCTCCAAACGGGTTGGTGGAGTCATCACCCAAATGTCTCTGACCATTGTGATTGGGAAGGTATCAGATGCAATGAAGATGGAAGCGTTGTTTATATATCCGGATGGGAATTAATTAATGAGTATCTGTTATCAGAAGAAATGCTGGAGATTGGGAAGTTGAACGTCACTGCCTTCTCGAATTTAGTGATTCTAGATCTAAATGGAATGGGACTAGGAGGAAGCATCCCTAAAGAAATAACCACACGTATAATGCTTGAAGATCTTGACCTGTCCAACAATCGCCTTCGTGGTCCTATACCCCTCCAACTTGCCAATTTCACACGTTTGAAGATGTTGTCTCTCCATAGTAATTCCCTTTCCGGTTCAATCCCTTCTACAGTGGGTCAATTGAAGAATTTAACCTATCTCTACCTTGAGTCAAACCAATTTCAAGGTCCTATTCCAATGGAACTGGGGAATCTGACACAATTGAAACAATTAGGTCTCTCACATAATTCACTTTCCGGTTCAATCCCTTCCACATTGGGTCAATTGAAGAATTTAACCTATCTCTACCTTGATTCAAACCAATTTGACGGTCCCATACCAATGGAACTGGGGAATCTGACACAATTGAAAGAATTAGATCTCTCACATAATTCACTTTCCGGTTCAATCCCTTCCACGTTGGGTCAATTGAAGAATTTAACCTATCTCTACCTTCCTTCAAACCAATTTGAAAGTCCTATTCCAATGGAACTGGGGAATCTGACACAATTGAAAGTATTATATCTCTCACATAATTCACTTTCCGGTTCAATCCCTTCCACGTTGGGTCAATTGAAGAATTTAATCTCTCTCTATCTTCATTCAAACCAATTTGAAGGTCCTATTCCAATGGAACTGGGGAATCTGACACAATTGGAAGTATTATATCTCTCACATAATTCACTTTCCAGTTCAATCCCTTCCACGTTGGGTCAATTGAAGAATTTAAAGCATCTCTATCTTGATTCAAACCAATTTCAAGGTCCTATTTCAATGGAACTGGGGAATCTGACACAATTGAAACAATTAGATCTCTCACATAATTCACTTTCCGGTTCAATCCCTTCCACGTTGGGTCAATGGAAGAATTTAATCTATCTCTATCTTCATTCAAACCAATTTGAAGGTCCCATACCAATAGAAGTAGTGAACTTGACACTTTTACAACACTTACATCTTTCCCACAACCACCTCACCAGCTCTATCCCATCTCCTATCCTGAATTGTCCACTTGCAACAGTGGATTTAAGCTGTAACTTGTTAAATGGAAGCATCACTTCCCAAATTGGTTGTGTCACTGACCTTAACCTTAGTCATAATTTTTTCAGCGGCCAGGTTCCATCTGTTTTTGGAACAAATTCTATGATGGATAGGTTGGATCTTAGTTATAATAATCTGACTGGTAAGTTACATACGGAACTTGCGAATTTAGGATATATAAATCTTTCATACAATTTTTTTGACTTTCCAGAAAACCTTGACTCAGAATCTAAATTACCGGACTTCTGTTCTTTCCCAAAAAATGCACTTATCACTTACGACCCACCTAATTACGCAGCTTGTTATGTCCTCCAAACCAATTCTCACTCTAGTACAACAACTAGTAAAGTAAAGACTATCATTGTAATTGCTCTTCCTATCACTTGCATCATTCTTTCTGTACTTGCAACATTATATTTCCCAAAGTGTATGAATAAGGCCAAATTTGAAGGAAGATCAACAAAGAATGGAGACTTCTTTTCTATATGGAACTATGACGGTAAAATTGCATTTGAAGACGTCATTGAAGCAACTGAGGACTTTCACCTCAAGTACTGCATTGGAACTGGTGCATATGGTAGTGTCTATAAAGCACAATTGCCTAGCGGTAACATTGTTGCATTGAAGAAACTTCACCAAATGGAATCTCAAAATCCAGCTTTTGACAAGAGTTTTCGCAATGAGGTCAAGATGTTAACTGGAATACGCCACAAAAACATTGTGAAGCTTCATGGATATTGCCTTCACAATCGTAGCATGTTTCTTGTCTACCAATACATGGAAAGAGGTAGCTTATTTTATGTCTTGAACAACGATGTGGAAGCTGAGGAGTTGAATTGGAGTATGAGGGTGAATATCATTAAAGGAATGGCACATGCTTTGTCCTACATGCATCATGATTGTACCCCACCAATTGTTCATCGTGATGTAACAACTAGCAATGTTTTATTGAACTCACAATTGGAGGCTTTTGTTTCAGACTTTGGCACTGCTAGACTCCTTGATCCTCATTCCTCCAATCAAACCTTAGTAGTCGGCACTTATGGCTATGTTGACCCAGAGCTTGCATACACATTGAAGGTGACAGAAAAATGTGATGTTTACAGTTTTGGAGTTGTGGCTTTGGAAACATTAATGGGAAGGCATCCAGGAGAGCTACTCTCATCTTTATCAAACCCATCTAATCAAAACTTCCTGTTGAAGGATATCTTGGATTCACGTCTTCCCCTTCCTTCCAGTCAAAAAGATGCTCAAGATATTGTACTTGTGGGGACAATAGCATTAGCATGTTTGTGTTCCAAACCAAAGTTCAGACCATCAATGCAACAAGTGGCTAGGAAACTCTCTTGTTCCAAATTGTCATTGCCTTTGCCTTTGTATGAGATTTCAATCCATCTCTTAATGTCTCAAGAAATATGA 2799 0.3894 MGSLVAVTLFSAMLMPTCTALSSINEEKQALLQTGWWSHHPNVSDHCDWEGIRCNEDGSVVYISGWELINEYLLSEEMLEIGKLNVTAFSNLVILDLNGMGLGGSIPKEITTRIMLEDLDLSNNRLRGPIPLQLANFTRLKMLSLHSNSLSGSIPSTVGQLKNLTYLYLESNQFQGPIPMELGNLTQLKQLGLSHNSLSGSIPSTLGQLKNLTYLYLDSNQFDGPIPMELGNLTQLKELDLSHNSLSGSIPSTLGQLKNLTYLYLPSNQFESPIPMELGNLTQLKVLYLSHNSLSGSIPSTLGQLKNLISLYLHSNQFEGPIPMELGNLTQLEVLYLSHNSLSSSIPSTLGQLKNLKHLYLDSNQFQGPISMELGNLTQLKQLDLSHNSLSGSIPSTLGQWKNLIYLYLHSNQFEGPIPIEVVNLTLLQHLHLSHNHLTSSIPSPILNCPLATVDLSCNLLNGSITSQIGCVTDLNLSHNFFSGQVPSVFGTNSMMDRLDLSYNNLTGKLHTELANLGYINLSYNFFDFPENLDSESKLPDFCSFPKNALITYDPPNYAACYVLQTNSHSSTTTSKVKTIIVIALPITCIILSVLATLYFPKCMNKAKFEGRSTKNGDFFSIWNYDGKIAFEDVIEATEDFHLKYCIGTGAYGSVYKAQLPSGNIVALKKLHQMESQNPAFDKSFRNEVKMLTGIRHKNIVKLHGYCLHNRSMFLVYQYMERGSLFYVLNNDVEAEELNWSMRVNIIKGMAHALSYMHHDCTPPIVHRDVTTSNVLLNSQLEAFVSDFGTARLLDPHSSNQTLVVGTYGYVDPELAYTLKVTEKCDVYSFGVVALETLMGRHPGELLSSLSNPSNQNFLLKDILDSRLPLPSSQKDAQDIVLVGTIALACLCSKPKFRPSMQQVARKLSCSKLSLPLPLYEISIHLLMSQEI* 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1457 932 Pfam Leucine rich repeat 232 270 IPR001611 GO:0005515
Apr10g1457 932 Pfam Leucine rich repeat 116 174 IPR001611 GO:0005515
Apr10g1457 932 Pfam Leucine rich repeat 379 438 IPR001611 GO:0005515
Apr10g1457 932 Gene3D Phosphorylase Kinase; domain 1 604 719 - -
Apr10g1457 932 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 273 926 - -
Apr10g1457 932 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 27 404 - -
Apr10g1457 932 PRINTS Leucine-rich repeat signature 236 249 - -
Apr10g1457 932 PRINTS Leucine-rich repeat signature 377 390 - -
Apr10g1457 932 SMART LRR_typ_2 425 449 IPR003591 -
Apr10g1457 932 SMART LRR_typ_2 281 305 IPR003591 -
Apr10g1457 932 SMART LRR_typ_2 137 161 IPR003591 -
Apr10g1457 932 SMART LRR_typ_2 377 401 IPR003591 -
Apr10g1457 932 SMART LRR_typ_2 185 209 IPR003591 -
Apr10g1457 932 SMART LRR_typ_2 329 353 IPR003591 -
Apr10g1457 932 SMART LRR_typ_2 233 257 IPR003591 -
Apr10g1457 932 Pfam Leucine Rich repeats (2 copies) 330 368 IPR025875 -
Apr10g1457 932 Pfam Leucine Rich repeats (2 copies) 282 317 IPR025875 -
Apr10g1457 932 Gene3D Ribonuclease Inhibitor 20 178 IPR032675 -
Apr10g1457 932 Gene3D Ribonuclease Inhibitor 280 549 IPR032675 -
Apr10g1457 932 SMART LRR_sd22_2 233 248 - -
Apr10g1457 932 SMART LRR_sd22_2 377 392 - -
Apr10g1457 932 SMART LRR_sd22_2 329 358 - -
Apr10g1457 932 SMART LRR_sd22_2 281 310 - -
Apr10g1457 932 SMART LRR_sd22_2 257 278 - -
Apr10g1457 932 SMART LRR_sd22_2 161 187 - -
Apr10g1457 932 Pfam Protein kinase domain 642 905 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1457 932 SUPERFAMILY Protein kinase-like (PK-like) 624 908 IPR011009 -
Apr10g1457 932 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 273 926 - -
Apr10g1457 932 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 27 404 - -
Apr10g1457 932 SUPERFAMILY L domain-like 45 368 - -
Apr10g1457 932 ProSitePatterns Tyrosine protein kinases specific active-site signature. 765 777 IPR008266 GO:0004672|GO:0006468
Apr10g1457 932 ProSiteProfiles Leucine-rich repeat profile. 235 257 IPR001611 GO:0005515
Apr10g1457 932 Gene3D Transferase(Phosphotransferase) domain 1 720 914 - -
Apr10g1457 932 SUPERFAMILY L domain-like 305 527 - -
Apr10g1457 932 Gene3D Ribonuclease Inhibitor 179 277 IPR032675 -
Apr10g1457 932 ProSiteProfiles Protein kinase domain profile. 641 920 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1457 932 ProSitePatterns Protein kinases ATP-binding region signature. 647 669 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1457 Apr-Chr10 26984187 26987508 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1457 5 813 Receptor kinase-like Gene Family AT4G08850 36.043 5.03e-163 502
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Apr10g1457 Pkinase 7.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1457 - - aprc:113851126 1814.66