Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1456 ATGGAAGCAAGAGAAGGTATTAGTTCTGGGGTTACAGTGATAGGGGCAGAAGCTCCATCGGCTTATCACGTGGCGCCGAGGAGTGAAGCTCCAAACCAGGTTCATGTTCCTGATGCTGCTGCTGCTGCTGCAGCAGCAGCAGCAGGTGTTGGTGTCTCACCTGTGAGTGTAGGGTTGGATGGAACAGCAGTTAAGAAGAAACGTGGTAGGCCAAGGAAGTATGGGCCAGATGGTTCTGTCACCATGGCATTGTCGCCGATGCCAATCTCGTCTTCAGCTCCGGCTTCTAATGACTTTTCATCCGGGAAGCGAGGGAAGATGCGGGGGATGGAATATAAGCAGTCCAAAAAAATTGGATTGGATTATCTAGGTGACTTGAATGCATGCTCAGATGGTACAAACTTTATGCCACATATCATAACTGTCAATGCTGGTGAGGACATCACAATGAAGGTGATATCCTTTTCTCAACAAGGGCCTCGAGCTATATGCATCTTATCTGCTAATGGTGTAATTTCGAATGTTACACTTCGTCAGCCTGATTCTTCTGGGGGTACTTTGACCTATGAGGGACGTTTTGAGATACTTTCCTTGTCTGGATCATTCATGCCTACTGATAACCAAGGAACAAGAAGCAGGTCAGGTGGGATGTCTGTCTCATTGGCAAGCCCTGATGGCCGCGTTGTAGGTGGTGGAGTTGCTGGTCTTCTTATAGCTGCTAGTCCTGTGCAGGTGGTGGTGGGAAGTTTTCTACCAACCAGCCAGCAAGATCAGAAACTGAAGAAGCCCAAGCCTACTGATTATGCACCTCCAACTGTTACTCCAGCCATTGCAGTGTCTTCTGCACCCCCACCACCACCTAATACTGAAAAAGAAGATATCAATGTCATTGGTGGAGCACATGTACTGCAAAATTCTGGATCCCTTAACTCAAACCTCACTCCTCCTAATGCCTTTAGAAGAGACAACTGGGTCAACATGCACTCTATGCCAGACTCAAGAAAGTCAGCTACTGATATTAACATATCTTTGCCTGATAGTTAA 1044 0.4713 MEAREGISSGVTVIGAEAPSAYHVAPRSEAPNQVHVPDAAAAAAAAAAGVGVSPVSVGLDGTAVKKKRGRPRKYGPDGSVTMALSPMPISSSAPASNDFSSGKRGKMRGMEYKQSKKIGLDYLGDLNACSDGTNFMPHIITVNAGEDITMKVISFSQQGPRAICILSANGVISNVTLRQPDSSGGTLTYEGRFEILSLSGSFMPTDNQGTRSRSGGMSVSLASPDGRVVGGGVAGLLIAASPVQVVVGSFLPTSQQDQKLKKPKPTDYAPPTVTPAIAVSSAPPPPPNTEKEDINVIGGAHVLQNSGSLNSNLTPPNAFRRDNWVNMHSMPDSRKSATDINISLPDS* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1456 347 CDD DUF296 137 250 IPR005175 -
Apr10g1456 347 Gene3D - 137 264 - -
Apr10g1456 347 MobiDBLite consensus disorder prediction 84 99 - -
Apr10g1456 347 Pfam Plants and Prokaryotes Conserved (PCC) domain 137 250 IPR005175 -
Apr10g1456 347 MobiDBLite consensus disorder prediction 66 105 - -
Apr10g1456 347 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 346 IPR039605 GO:0003680
Apr10g1456 347 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 1 346 - -
Apr10g1456 347 SUPERFAMILY AF0104/ALDC/Ptd012-like 135 255 - -
Apr10g1456 347 ProSiteProfiles PPC domain profile profile. 132 274 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1456 Apr-Chr10 26977720 26984070 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1456 10 282 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 58.194 5.30e-101 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1456 - - gmx:100793726 577.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1456 10 26977720 26984070 Apr10g1456 10 26977720 26984070 ECH