Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1454 ATGGATTGTGGGGGTAAGATTGGTGGAGGTGAGAGAAGTGGGCCTTGTGGTGCTTGTAAGTTTCTGAGGAGAAAGTGTGTGAAGGGTTGCATATTTGCACCTTACTTTGACTCAGACCAAGGAACGGCTCATTTTGCTGCGGTGCATAAGGTGTTTGGTGCTAGCAATGCCTCTAAGCTACTCATGCGCATCCCAGTTCACAAGCGTCTTGATGCTGTTGTTACTCTTTGCTATGAGGCTCTTGCTAGGGCTAGAGACCCCGTTTATGGTTGTGTTGGCCACCTCTTTGCTCTTCAACAACAGGTCATGAACTTGCAGGCTGAGCTAACCTATGTCCAGGCCCGTCTTGCCACAATGCAACGGTTGCCAGTCACAGTAGCTCCTCTTACACTCCCTCAAAGCTCTTCACCAACGAGTCTCCATTCCTCTTCAGATCACTTGCCATCAAGTGCTGACATGCAAAGTGTCTCTATGCACTTTGATTCTCTTCAACAACATTCAACATCACTAGAATTAAGCAGCTTTTTCAATCCATCAGAACAACAACTGGAGGATGGGGAACTCCAAGCTTTGGCTCGAGAATTTGTGTCTAGATACTTGCCCGGAGTGAGATTCCAGCCATCCAACCCTCACTGA 636 0.478 MDCGGKIGGGERSGPCGACKFLRRKCVKGCIFAPYFDSDQGTAHFAAVHKVFGASNASKLLMRIPVHKRLDAVVTLCYEALARARDPVYGCVGHLFALQQQVMNLQAELTYVQARLATMQRLPVTVAPLTLPQSSSPTSLHSSSDHLPSSADMQSVSMHFDSLQQHSTSLELSSFFNPSEQQLEDGELQALAREFVSRYLPGVRFQPSNPH* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1454 211 Pfam Lateral organ boundaries (LOB) domain 15 113 IPR004883 -
Apr10g1454 211 PANTHER LOB DOMAIN CONTAINING PROTEIN 10 201 - -
Apr10g1454 211 PANTHER LOB DOMAIN-CONTAINING PROTEIN 19 10 201 - -
Apr10g1454 211 ProSiteProfiles LOB domain profile. 14 116 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1454 Apr-Chr10 26953887 26958450 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1454 4 209 AS2 family AT4G00210 56.164 1.89e-76 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Apr10g1454 LOB 3e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1454 - - gmx:100791377 330.102