Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1453 ATGAGTATAAATTCTAGTTGTAGCGGAAGTGGTGGTGGTAGTAGTAGCGGCGGCGGCAGCAATAGCGGTGGCGGTAGCCCATGTGGGGCATGCAAGTTTTTGAGGAGAAAGTGCGTGCCAGGTTGCATCTTTGCTCCATACTTTGATTCAGAGCAAGGTGCCACGCATTTTGCGGCGGTGCATAAGGTTTTTGGAGCTAGTAACGTTTCCAAGTTACTCCTTAACATTCCAGTGCATAAGAGGCTTGATGCGGTTGTCACCATTTGTTATGAAGCACAAGCAAGGCTTAGAGACCCCGTGTATGGTTGTGTTGCTCATATCTTTGCTCTTCAGCAACAGGTGGTGAGTTTGCAAGCAGAACTCTCATACTTACAAGGCCACCTTGCAACACTAGAGTTACCCCAACCACCACCACCTTCTTCACCACAAGCAACCATAGCACCACCAGTGATCTCAATAGCTGACCTCCCATCAGCCCCTGCCTCCACCGTGCCAGCCACATATGACTTATCTTCACTTTTTGACCCAATGGCCCAAAATTCTTCATGGGCCATGCAGCAAAGGCCCATAGACCCACGTCAATATTTGGGTAGTGGCCCATCAGCCTCTAGTGGTAGTGGTGGTGATCTTCAAGCCTTGGCTCGTGAGCTTTTGCATAGACATGGATCTGCCCCTGTTGCATGCTCTAATCCCTCTTCATCTCACTCCCTTTCCAAATGA 720 0.4944 MSINSSCSGSGGGSSSGGGSNSGGGSPCGACKFLRRKCVPGCIFAPYFDSEQGATHFAAVHKVFGASNVSKLLLNIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVSLQAELSYLQGHLATLELPQPPPPSSPQATIAPPVISIADLPSAPASTVPATYDLSSLFDPMAQNSSWAMQQRPIDPRQYLGSGPSASSGSGGDLQALARELLHRHGSAPVACSNPSSSHSLSK* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1453 239 MobiDBLite consensus disorder prediction 1 25 - -
Apr10g1453 239 PANTHER LOB DOMAIN-CONTAINING PROTEIN 18 1 223 - -
Apr10g1453 239 MobiDBLite consensus disorder prediction 189 216 - -
Apr10g1453 239 Pfam Lateral organ boundaries (LOB) domain 27 125 IPR004883 -
Apr10g1453 239 ProSiteProfiles LOB domain profile. 26 128 IPR004883 -
Apr10g1453 239 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 223 - -
Apr10g1453 239 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1453 Apr-Chr10 26936072 26940961 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1453 30 239 AS2 family AT2G45420 65.625 1.37e-86 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Apr10g1453 LOB 1.9e-38 No_clan