Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1450 ATGGATCCTGTAGCAGCACAAGGACGTCCTCTCCCTCCACCCTTTCTCACTAGAGATCTTCACCTACACCCTCACCACCAATTCCAACCCCACCACAACCACCAAAACACTGAAGAAGAAAGTGCTAATGGCCGTGGCCAGAAGCGAGATCGAGAGGACAACACCGCGGGTGGCGGTGCCAACACTCCTCCCCACGGCGGTATGGAAGGCAAAGACCCTGGGTCAGGAGAAGGAGGAGGAAGTGAAATGTCAAGAAGACCAAGAGGAAGACCGGCAGGGTCCAAAAACAAGCCCAAACCACCCATTATCATCACAAGAGACAGTGCTAATGCTCTCCGATCCCATGTCATGGAAATTGCCAACGGTTGTGACATCATGGAGAGTGTCACCGCCTTCGCAAGGCGGCGACAACGCGGTGTTTGTGTCCTCAGCGGCAGCGGCACCGTCACTAATGTCACCCTGCGGCAACCGGCCTCGCCGGGTGCTGTCGTGACCCTTCATGGAAGGTTCGAGATTTTGTCCCTGTCCGGTTCATTCCTGCCGCCGCCGGCACCTCCGGCAGCGTCGGGACTAGCCATATACTTGGCTGGAGGACAAGGACAAGTAGTTGGTGGAAGCGTGGTGGGACCCCTTTTGGCTTCTGGCCCTGTTGTTATCATGGCTGCTTCATTTGGTAATGCTGCTTATGAGAGGTTACCCTTGGAAGAAGAGGAAACTCCAGTTGCAGTTAATAGCACAGGAGGGTTAGGGTCCCCAGGGATTGTGGGAACACAGCAACAACCACAACCGCAATCACAACAACAACTTGTGGGAGATCCTAATAGTTCTCTTTTCCATGGAGTGCCTCAGAATCTTCTCAATTCGTGTCAATTACCAGCAGAGGGTTATTGGGGTGGCAGTGCTCGCCCTCCTTTTTAA 918 0.5392 MDPVAAQGRPLPPPFLTRDLHLHPHHQFQPHHNHQNTEEESANGRGQKRDREDNTAGGGANTPPHGGMEGKDPGSGEGGGSEMSRRPRGRPAGSKNKPKPPIIITRDSANALRSHVMEIANGCDIMESVTAFARRRQRGVCVLSGSGTVTNVTLRQPASPGAVVTLHGRFEILSLSGSFLPPPAPPAASGLAIYLAGGQGQVVGGSVVGPLLASGPVVIMAASFGNAAYERLPLEEEETPVAVNSTGGLGSPGIVGTQQQPQPQSQQQLVGDPNSSLFHGVPQNLLNSCQLPAEGYWGGSARPPF* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1450 305 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 18 4 305 - -
Apr10g1450 305 PIRSF ESCAROLA 16 305 IPR014476 GO:0003680
Apr10g1450 305 ProSiteProfiles PPC domain profile profile. 109 247 IPR005175 -
Apr10g1450 305 CDD DUF296 113 180 IPR005175 -
Apr10g1450 305 SUPERFAMILY AF0104/ALDC/Ptd012-like 109 242 - -
Apr10g1450 305 MobiDBLite consensus disorder prediction 244 274 - -
Apr10g1450 305 MobiDBLite consensus disorder prediction 19 55 - -
Apr10g1450 305 MobiDBLite consensus disorder prediction 242 274 - -
Apr10g1450 305 Pfam Plants and Prokaryotes Conserved (PCC) domain 113 225 IPR005175 -
Apr10g1450 305 Gene3D - 112 243 - -
Apr10g1450 305 MobiDBLite consensus disorder prediction 1 103 - -
Apr10g1450 305 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 4 305 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1450 Apr-Chr10 26888777 26889694 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1450 1 305 AT-hook Motif Nuclear Localized (AHL) Family AT2G45430 65.337 6.20e-90 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1450 - - gmx:100816243 454.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1450 10 26888777 26889694 Apr10g1450 10 26888777 26889694 ECH