Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1449 ATGGTGGCTGATGCTGATTTTGGTGACTCTGTTGAATTACAACCAGAGCTTAAAAGACTGAAACTTCGGAGAAACAATTGGGATTCAGACACTTATGAATTTGATGAAGTGCTTACTGAGTTTGCATCACAGAAACGTGTTTATGAAGTTGTAGCTAAGCCAGTTGTTGAGAGTGTTCTTGATGGTTATAATGGAACTGTAATGACTTATGGTCAAACTGGAACGGGGAAAACTTTTACTCTTGGACAATTGGGGGAGGAAGACACCTCTGATCGTGGTATCATGGTTCGTTCCATGGAGGATATCTTAGGTGACTTATCTCCAGAAACTGATTTGGTCACTGTCTCATATCTGCAGCTTTACATGGAGACTCTCCAGGACTTACTTAATCCAGCAAATGATAATATTCCCATCTTGGAAGATCCAAGAACTGGTGATGTGTCTTTGCCTGGGGCAACTCTTGTGGAAATCAGGGATCAGCAAAGCTTCTTGGAGTTGCTAAGAGTTGGAGAAGCTAATCGAGTTGCTGCCAACACAAAGTTGAATACTGAATCTTCTCGTAGTCATGCTATACTGACGGTACATATTAAGAGGTTTGCTGTGGATAGTGAAGATATTGTTTCTACTGAAAATAATGATGCCTCTCACTGGACTAAACCTTCAAAACCACTTGTTCGAAAGAGCAAGCTGGTTGTGGTAGATTTGGCCGGATCTGAGCGTATTCACAAGTCAGGAAGTGAGGGGCACATGCTAGAGGAAGCTAAATCCATCAATCTTTCACTTAGTGCACTAGGAAAATGTATTAATGCTCTAGCAGAAAACAATACTCATGTTCCATTTCGGGATTCAAAGCTTACTAGATTGCTTAGAGATTCATTTGGGGGAACAGCGAGGACTTCATTGATTGTTACTATTGGCCCTTCTCCACGTCATCGAGGAGAGACTTCTAGTACCATCTTGTTTGGCCAAAGGGCTATGAAAGTTGAGAATATGCTGAAAATAAAGGAGGAGTTTGATTATAAAAGTTTGTCTCGGAGGCAAGAGGTACAATTAGATAAGCTTATTGCGGAAAATGAAAGGCAGCAGAAGGCTTTTGAAGATGAAGTTGAAAGAATAAATTTGGAAGCACAAAGCCGAGTTGCTGAGGTTGAAAGGAAATTTTCAGATGCGTTAGAGAAAGAGAGACTGAAATGCCAGATGGAGTACATGGCATCAGTTAGGCAGCTGGAGCAGAAGTTGGTTTCAAGTGGAGAAAGACATGGCTGCAATTGGCTTGTGGATGGAATAAGATCTGCAAATGAATTTGCTGAGGTCAAAAAGCTGTTTGAAAATGAAAGCGTTAAGAGAAAAGCAGCTGAAGCAGAGGTACAAAATCTAAAAAGTCTGCTGGAGAAATATACTCGAACAGAGACAGGAGGGGATACAGAGATGATAAAGCTTAACAGCATTCTGAAGGATGGGGCTAATCAGGAAAAGAAACTTGAAGAAGAAATAATAATATTAAGTAGTCAATTATTGCAATTGAACTTTGAAGCTGATCAGATGAGAAGATGTTTAGAAAGTGAAAGCTCTGTAAATGCATCCCCTGCTATGGATTCTTCCATGTCTCAAGTTAGGCATTCTCAACACAAATACACTGGGAATGGTCAGAAGGCATCTTTTGCTGCACTCTTTGAGCAAGTTGGGTTGCAAAAGATTTTGTCTTTGCTGGAGTCTGATGATGCCAATGTACGAATTCATGCTGTTAAAGTGGTGGCCAACCTAGCAGCAGAAGAGGCAAATCAAAAAAGTATTGTTGAAGCTGGTGGTCTTACTTCCTTGTTGATGCTTCTTAGAAGATATGATGATGAAACTGTCCGCAGAGTGGCAGCAGGGGCAATTGCCAATCTTGCCATGAATGAAGCCAATCAAGAACTTATAATGGCTGAAGGGGGAGTCACTTTGTTAGCAATAGCTGCATCTGATGCTGAAGAACCTCAAACTCTTCGAATGGTTGCTGGTGCCATAGCTAACCTATGTGGAAATGATAAAATATTAATGAAGCTGAGATCCCAGGGAGCTATCAAGGCCATACTGGGAATTGTAAGATGTGGACATCCTGATGTTCTTTCCCAAGTTGCACGAGGAATTGCCAATTTTGCCAAATGCGAGTCTCGAGCTTCCAATCAAGGGATAAAAAGTGGTAGGTCTTTTCTGATAGAAGATGGCGCACTTCCATGGATAGTACAGAATGCTAATAATGAAGCTACACCAATCAGGCGTCACATTGAACTTGCACTGTGCCACTTAGCACAGCATGAAGTAAATGCAAAAGATATGATCAGTGGAGGTGCCCTTTGGGAGCTTGTCCGAATTTCGAGAGATTGTACACGAGAGGACATAAGGAATCTTGCTCGTGGGACTCTCGGTTCTATCCTGCCTTTCAAATCTGAATTACGGCGTTTACGTATAGACTATTGA 2460 0.415 MVADADFGDSVELQPELKRLKLRRNNWDSDTYEFDEVLTEFASQKRVYEVVAKPVVESVLDGYNGTVMTYGQTGTGKTFTLGQLGEEDTSDRGIMVRSMEDILGDLSPETDLVTVSYLQLYMETLQDLLNPANDNIPILEDPRTGDVSLPGATLVEIRDQQSFLELLRVGEANRVAANTKLNTESSRSHAILTVHIKRFAVDSEDIVSTENNDASHWTKPSKPLVRKSKLVVVDLAGSERIHKSGSEGHMLEEAKSINLSLSALGKCINALAENNTHVPFRDSKLTRLLRDSFGGTARTSLIVTIGPSPRHRGETSSTILFGQRAMKVENMLKIKEEFDYKSLSRRQEVQLDKLIAENERQQKAFEDEVERINLEAQSRVAEVERKFSDALEKERLKCQMEYMASVRQLEQKLVSSGERHGCNWLVDGIRSANEFAEVKKLFENESVKRKAAEAEVQNLKSLLEKYTRTETGGDTEMIKLNSILKDGANQEKKLEEEIIILSSQLLQLNFEADQMRRCLESESSVNASPAMDSSMSQVRHSQHKYTGNGQKASFAALFEQVGLQKILSLLESDDANVRIHAVKVVANLAAEEANQKSIVEAGGLTSLLMLLRRYDDETVRRVAAGAIANLAMNEANQELIMAEGGVTLLAIAASDAEEPQTLRMVAGAIANLCGNDKILMKLRSQGAIKAILGIVRCGHPDVLSQVARGIANFAKCESRASNQGIKSGRSFLIEDGALPWIVQNANNEATPIRRHIELALCHLAQHEVNAKDMISGGALWELVRISRDCTREDIRNLARGTLGSILPFKSELRRLRIDY* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1449 819 Pfam Armadillo/beta-catenin-like repeat 594 631 IPR000225 GO:0005515
Apr10g1449 819 PRINTS Kinesin heavy chain signature 62 83 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr10g1449 819 PRINTS Kinesin heavy chain signature 179 196 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr10g1449 819 PRINTS Kinesin heavy chain signature 278 299 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr10g1449 819 Gene3D - 530 815 IPR011989 -
Apr10g1449 819 Coils Coil 442 469 - -
Apr10g1449 819 ProSiteProfiles Kinesin motor domain profile. 1 328 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr10g1449 819 MobiDBLite consensus disorder prediction 524 544 - -
Apr10g1449 819 ProSitePatterns Kinesin motor domain signature. 228 239 IPR019821 GO:0003777|GO:0005524|GO:0007018
Apr10g1449 819 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 602 645 IPR000225 GO:0005515
Apr10g1449 819 SMART arm_5 550 590 IPR000225 GO:0005515
Apr10g1449 819 SMART arm_5 633 674 IPR000225 GO:0005515
Apr10g1449 819 SMART arm_5 591 632 IPR000225 GO:0005515
Apr10g1449 819 SMART arm_5 675 715 IPR000225 GO:0005515
Apr10g1449 819 SMART arm_5 765 807 IPR000225 GO:0005515
Apr10g1449 819 PANTHER KINESIN-LIKE PROTEIN 1 807 IPR033291 GO:0008017|GO:0032886|GO:0048364
Apr10g1449 819 SUPERFAMILY ARM repeat 556 813 IPR016024 -
Apr10g1449 819 PANTHER KINESIN-RELATED 1 807 IPR027640 GO:0003777|GO:0007018
Apr10g1449 819 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 361 IPR027417 -
Apr10g1449 819 Coils Coil 344 393 - -
Apr10g1449 819 Pfam Kinesin motor domain 15 328 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr10g1449 819 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 561 603 IPR000225 GO:0005515
Apr10g1449 819 CDD KISc 31 326 - -
Apr10g1449 819 Gene3D Kinesin motor domain 5 358 IPR036961 -
Apr10g1449 819 SMART kinesin_4 8 336 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1449 Apr-Chr10 26868752 26878907 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1449 27 356 Calmodulin-binding Proteins AT5G65930 35.000 1.90e-44 172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1449 10 26868752 26878907 Apr10g1449 10 26868752 26878907 ECH