Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1444 ATGGAAGCTAAGCCTCTTCGAATTGTTCCCTCTTCACACAACACTTCTGAAGGTGGACCCCAGAAGAAGATTGACATGGGACACATGATGGAAGGTGGTGTTGTTGTTGATGAGGGAAAGAGGGTTGTTTTGGTCAATGAGGAGAAAGAGAACTCTTCTTCAAGTGTTGAACTTCATCTTGGGGTTGCTGCTCATTCTGCACCACAACCAATAAACCATGTCATGATCACAGAAACTCAGAGGCTTGAGCTTGACCATCAAGTTTTCATCTTCAACCACTTGGTTTCTAACCTTCCTCTTCCTCAATCTCATCACCACCTTGTGCAATTCCCAACCAATATGTCAGAATACAGTCACCTTGGTTTTGATTATGGGAATATGGTGGATCCAGAACCACATAGGTGTAGAAGAACTGATGGTAAGAAATGGAGGTGTAGTAAGCATGTTGTGCCTGATCAGAAGTACTGTGAAAGGCACATGCATAGAGGTCGCAATCGTTCAAGAAAGCCTGTGGAAACATCTCATGCCAACTCTCCTTTGGGTGCAAAACCTTCTACCAAGTTACATACCAAAAAGACAGAAGTTGAAGTTTCGAATCCAAACCTTTTGGGTGACACATCTTCCAGCACTGCATCAAGGAGCCCCAGTATTGTCAATTGCCCTTCTGCTAATAATAGGCCGAACAATATCGAAAGTTCTGCTGACTACCTTGCAACTTTTTCTTCAGCCTCTATGGCATCCCCTGGCTCCATTCTTGCCACTAAAGTTGCTCCTAAGGTAGCCCCTTTCAGCAGCGTTGCAAATGCTACTTCAGATTACAAAAGTTGCTTGAATGTGTGCAAGAAAGATAACCAGACCAAGAGCAGTATTGGCAGCAACATTGGTATTAAACGTGGAGGGAAAGGAAGCATTGTTGGTGAGAGTAATGGAATGTCTACTGGAATAGGCTTCTCTCCAAGGAGTGTTCTTCAAGTTTCTGGTTGCAACTCTTCATACCTGAATGATAGAAACAACATAGAACCTGAACCCGGAAGGTGCCGGAGAACAGATGGTAAGAAGTGGCGTTGCAAGAGTGCTGTTCTTCCCGGTCAGAAGTATTGTGCCACTCACATGCACAGAGGTGCGAAAAAGCGTTTCACAAACCATGAACCGGCTGCCACATCTTCTGCTGTTACCATTGCTAGGTTGCCTCACACTTCAGCCTCAAGCAACATTCAGAAAGCTTATTGTACAATTCCAAATACAAATCTTTCGATGTCAATCCCAACAAGTGCCCCTTTCATAAAGTGTAATGAGAAAAGTCCTAGTAGCAGTGACACTGATACCACCATCACTGACACCTTGAATGAGTGTAGCTATGCTTCTTTCTGA 1371 0.4406 MEAKPLRIVPSSHNTSEGGPQKKIDMGHMMEGGVVVDEGKRVVLVNEEKENSSSSVELHLGVAAHSAPQPINHVMITETQRLELDHQVFIFNHLVSNLPLPQSHHHLVQFPTNMSEYSHLGFDYGNMVDPEPHRCRRTDGKKWRCSKHVVPDQKYCERHMHRGRNRSRKPVETSHANSPLGAKPSTKLHTKKTEVEVSNPNLLGDTSSSTASRSPSIVNCPSANNRPNNIESSADYLATFSSASMASPGSILATKVAPKVAPFSSVANATSDYKSCLNVCKKDNQTKSSIGSNIGIKRGGKGSIVGESNGMSTGIGFSPRSVLQVSGCNSSYLNDRNNIEPEPGRCRRTDGKKWRCKSAVLPGQKYCATHMHRGAKKRFTNHEPAATSSAVTIARLPHTSASSNIQKAYCTIPNTNLSMSIPTSAPFIKCNEKSPSSSDTDTTITDTLNECSYASF* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1444 456 MobiDBLite consensus disorder prediction 195 226 - -
Apr10g1444 456 Pfam WRC 130 172 IPR014977 -
Apr10g1444 456 Pfam WRC 341 380 IPR014977 -
Apr10g1444 456 ProSiteProfiles WRC domain profile. 129 173 IPR014977 -
Apr10g1444 456 PANTHER GROWTH-REGULATING FACTOR 9 48 288 - -
Apr10g1444 456 PANTHER GROWTH-REGULATING FACTOR 9 324 409 - -
Apr10g1444 456 MobiDBLite consensus disorder prediction 1 25 - -
Apr10g1444 456 MobiDBLite consensus disorder prediction 156 226 - -
Apr10g1444 456 ProSiteProfiles WRC domain profile. 340 384 IPR014977 -
Apr10g1444 456 PANTHER - 48 288 IPR031137 GO:0005634|GO:0006351|GO:0032502
Apr10g1444 456 PANTHER - 324 409 IPR031137 GO:0005634|GO:0006351|GO:0032502
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1444 Apr-Chr10 26824510 26827803 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1444 80 393 GRF Transcription Factor Family AT2G45480 34.746 3.71e-41 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1444 - - gmx:100795050 650.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1444 10 26824510 26827803 Apr10g1444 10 26824510 26827803 ECH