Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1442 ATGAACGAAAACCCCAAACGACAATGGTCCCTCAACGACTTCGAGATAGGCAAGCCTCTCGGCAAGGGCAAATTCGGTAGAGCCTATGTAGCCAGAGAAATCAAGAGCAAATTTGTGGTTGCATTGAAGATTATTTATAAGGAACAAGTTAAGAAGTACAAGATTCGTCATCAATTAAAGAGGGAAATGGAGATTCAGATGGGTCTTAAGCACCCCAACATTCTGCGTCTCTATGGTTGGTTTCATGATTCTGAGCGTGTTGTCTTAATTCTTGAATATGCTCACAATGGTGAGCTTTACACGGAGCTTAGTAAAAGAGGTCGTTTTACTGAGAACCAAGCTGCCACGTATATTCTCAGCCTCACAAAGGCATTGGCATATTGTCATGAGAAGCATGTTATTCACAGGGATATCAAGCCTGAAAATTTGCTGCTTGACCATGAGGGTCGTCTTAAGATTGCAGACTTCGGTTGGTCTGTACAGTCTAGAAGCAAAAGACATACCATGTGCGGAACCTTGGATTATTTAGCACCTGAAATGATAGAAGACAAAGGTCATAATTATACAGTTGATAATTGGACTCTGGGTATCCTTTGCTATGAGTTCCTTTATGGTGCTCCTCCATTTGAGGCTGAGAGTCAAGCTGACACCTTCAGAAGGATAATAAAGGTTGACCTAAGCTTCCCTACTACCCCTTACGTTTCTTCCGATGCCAAAAATCTTATTAGCCGGCTCCTGGTAAAAGACTCCTCACATAGGCTCTCACTTCAGAAGATAACGGAGCATCCTTGGATAATCAAGAATGCAAATCCTATTGGTGTCTGCAAGTAG 831 0.4236 MNENPKRQWSLNDFEIGKPLGKGKFGRAYVAREIKSKFVVALKIIYKEQVKKYKIRHQLKREMEIQMGLKHPNILRLYGWFHDSERVVLILEYAHNGELYTELSKRGRFTENQAATYILSLTKALAYCHEKHVIHRDIKPENLLLDHEGRLKIADFGWSVQSRSKRHTMCGTLDYLAPEMIEDKGHNYTVDNWTLGILCYEFLYGAPPFEAESQADTFRRIIKVDLSFPTTPYVSSDAKNLISRLLVKDSSHRLSLQKITEHPWIIKNANPIGVCK* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1442 276 Pfam Protein kinase domain 14 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1442 276 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 3 271 IPR030616 GO:0004672
Apr10g1442 276 SUPERFAMILY Protein kinase-like (PK-like) 7 268 IPR011009 -
Apr10g1442 276 Gene3D Phosphorylase Kinase; domain 1 2 97 - -
Apr10g1442 276 SMART serkin_6 14 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1442 276 CDD STKc_Aurora 13 265 - -
Apr10g1442 276 Gene3D Transferase(Phosphotransferase) domain 1 98 272 - -
Apr10g1442 276 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Apr10g1442 276 PIRSF ILK 2 268 - -
Apr10g1442 276 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Apr10g1442 276 ProSiteProfiles Protein kinase domain profile. 14 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1442 Apr-Chr10 26812557 26816385 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1442 6 271 CBL-interacting serine-threonine protein kinases AT5G10930 39.194 1.46e-63 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Apr10g1442 Pkinase 8e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1442 K08850 - gmx:100775802 495.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1442 10 26812557 26816385 Apr10g1442 10 26812557 26816385 ECH