Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1440 ATGCCATTCATGGATCTACTTTCTAATCCATGTTTCTTTGCTGCATTTTCTGTAGTTTTAACTCTTTTGATGGTTAAAGTTATGTTGAGAAGATTGCAGAAAAGGGAAAGAAAGAAGTACCATCCTGTTGCTGGTACCATATTTAATCAGATGCTGAACTTCAATAGGTTGCACCATTATATGACTGAACTTGCAGGCAAATACAAGACATACAGGTTGCTCGGTCCTTTCAGATATGAGGTTTTCACTTCAGAACCATGTAATGTTGAGTATATACTCAAAACCAGATTTGAGAATTATGGAAAGGGGTTGTACAACTACAACAATTTGAAGGATTTACTAGGTGATGGTATTTTCACTGTTGATGGTGAGAAATGGCGTGAACAAAGGAAGATAACGAGTCATGAATTCTCCATCAAAATGTTAAGGGACTTCAGCATTTCAATATTCAGAAAGAATGCAGTAAAACTTGCAAACATAGTGTCTGAAGCTGCAACTTCTAATAGTACATTGGAAATCCAAGACCTTTTAATGAAATCAACTCTGGATTCAATTTTCCAAGTAGCATTTGGAACGGAACTTGACAGCATGTGTGGATCAAATCAAGAAGGGAAGACTTTTGCCGAGGCTTTTGATACTTCAAGTGCACTAACCGTTTATCGTTATGTAGATGTCTTCTGGAAGATAAAGAAATTTCTGAATATTGGATCAGAGGCCACGTTAAGAAAGAACATTGAAATTTTAAATGAATTTGTTTTTAAGCTGATCAACACTAGAATTCAACAAATAAAGATTTCAGAGGATGTTTCTACTAGTAAACGAGGAGATATTCTCTCAAGGTGTCTGCAAGGGAAAGAATATGATCCAATATACTTAAGAGATATAATTCTAAACTTTGTTATTGCTGGGAAAGACACAACAGCTGCCACACTTGCTTGGTTCTTGTGCATGGTATGTAAGTATCCTGCAGTTCAAGAAAAAGCAGCAGAAGAAGTGAGAGAAGCAACTAACACAAAAACAATTAGTAGCTATACTGAGTTTGTGTCCAGTCTCACGGATGAAGCTCTTGGAAAGATGAATTATCTCCATGCAGCAATTACAGAAACTCTCAGACTTTATCCTGCAGTTCCCGTGGATGCAAAGATTTGTTTTTCTGACGACACATTACCAGATGGATATAGTGTAAATAAAGGAGATATGGTAAGTTACCAACCTTATGCTATGGGTCGGATGAAATTCATTTGGGGTGATGATGCAGAAGAGTTTAAACCAGAAAGATGGCTTGATGAGAATGGGATTTTTAAGTCAGAGAGCCCTTTCAAGTTTACAGCTTTTCAGGCTGGTCCTAGGATTTGTCTAGGAAAGGAGTTTGCTTATAGACAGATGAAGATATTCTCAGCAGTATTGTTAGGCTGTTTCCGCTTCAAATTGAATGATGAGAAGAAAAATGTCACTTACAAGGCGATGCTAAATCTTCATATTGATGGAGGTCTTGAAATCAAAACCTTCCACAGATAA 1518 0.3689 MPFMDLLSNPCFFAAFSVVLTLLMVKVMLRRLQKRERKKYHPVAGTIFNQMLNFNRLHHYMTELAGKYKTYRLLGPFRYEVFTSEPCNVEYILKTRFENYGKGLYNYNNLKDLLGDGIFTVDGEKWREQRKITSHEFSIKMLRDFSISIFRKNAVKLANIVSEAATSNSTLEIQDLLMKSTLDSIFQVAFGTELDSMCGSNQEGKTFAEAFDTSSALTVYRYVDVFWKIKKFLNIGSEATLRKNIEILNEFVFKLINTRIQQIKISEDVSTSKRGDILSRCLQGKEYDPIYLRDIILNFVIAGKDTTAATLAWFLCMVCKYPAVQEKAAEEVREATNTKTISSYTEFVSSLTDEALGKMNYLHAAITETLRLYPAVPVDAKICFSDDTLPDGYSVNKGDMVSYQPYAMGRMKFIWGDDAEEFKPERWLDENGIFKSESPFKFTAFQAGPRICLGKEFAYRQMKIFSAVLLGCFRFKLNDEKKNVTYKAMLNLHIDGGLEIKTFHR* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1440 505 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1440 505 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1440 505 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1440 505 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1440 505 PANTHER CYTOCHROME P450 16 505 - -
Apr10g1440 505 SUPERFAMILY Cytochrome P450 39 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1440 505 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1440 505 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1440 505 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1440 505 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1440 505 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1440 505 PANTHER CYTOCHROME P450-RELATED 16 505 - -
Apr10g1440 505 Pfam Cytochrome P450 41 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1440 505 Gene3D Cytochrome P450 36 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1440 Apr-Chr10 26793282 26796249 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1440 4 505 Cytochrome P450 AT2G45510 51.859 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1440 - - gmx:100789049 861.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1440 10 26793282 26796249 Apr10g1440 10 26793282 26796249 ECH