LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr10g1437	ATGGACTACCTTGCACTTCTACTAATTTCCCTAGCATGTGTAACCATTCATGTCCTGGTCTCCAAGCTATGGATGAAAACACCCACATCCTCCAAATATCCCCCAGGGCCTCGCCCTTTACCAATCATAGGAAATATCTTACAACTTGGCAACCAACCTCATCAAGCACTTACCAAGCTTTCTCAAATTTATGGACCCATAATGAGTCTTAAGCTTGGTAACACAAACACCATAGTTATTTCCTCTCCACAAATTGCCAAAGAAGTGTTGCAAAAGAATGATCAAATCTTCTCTAATAGGAAAATCCCAGACACTCTTCGAGCACTTGATCACCACATGTTTTCAGTGGCGTGGTTGCCACCTTTAACACAATGGAGAACCCTTAGGAGAGTTTGTGCTACCAAAGTTTTCTCTTCTCAACAACTTGATTCTACCCAAGTTCTTCGTCAAAGGAAGGTACAAGAGTTGATGGATTATGTTGAGGAAAAATGTAAGAAAGGAGAAGCTTTGGATATTGGTGAAGCTTCCTTTACAACTGTTCTTAATTCAATTTCAAACACTTTTTTCTCTATGGATTTGGCTCATTACACTTCTGATGAGTCTCAAGAATTTAGGAACATCATTTGGGGTATCATGGAAGAAGCTGGGAAGCCTAATGTTGTGGACTTCTTCCCAATCTTTCGCACGCTTGATCCACAAGGTGCACGTACCAGAATGAGTAGTTATTTTGGAAAATTAATTGCGTTTTTTGATGGTCTTATAGATGAAAGATTGCGTTTAAGAGCTTTGGAAAATGAATCCAAGCCATGCAATGACGTGTTAGATTCTGTGCTAGAACTCATGCTTGAAGATGATTCGCAAGTCACTCGTCCCCATGTTTTGCATTTATTTCTGGATTTATTTGTTGCCGGAATAGACACAACATCAACCTCAATAGACTGGGTTATGACCGAGTTGCTACGTAACCCAGAAAAATTAGAAAAAGTTAGAAAAGAACTTGAGCAGGTCTTTGTCAAAGGTAAACAACTTGATGAATCACTTATCTCAAAGCTTCCTTTCCTACAAGCAGCAGTGAAAGAATCATTTCGTTTGCATCCACCAGTCCCACTCTTATTGCCACACAAATCAGGAGTTGATGCTGAACTATGTGGCTTCATGGTGCCTGAAAGTGCTCAAATTCTGGTTAATGTATGGGGCATGGGGAGAGATTCAAGTATTTGGATAAACCCAGATCAATTTATGCCTGAAAGATTCTTAGAAAGTGGGATTGATTTTAAAGGTAGAGATTTTGAGTTGATACCCTTTGGAGCTGGAAGAAGGATCTGTCCTGGGTTGCCATTGGCTTCAAGGACTGTGCACATTGTGTTGGCCTCTCTTTTATTTACCTATGATTGGAAGCCCATAGATGAGGACATGGATATTTCTGAGAAATGTGGGCTTTCCTTACATAAAGCCCTTCCTCTTCAAGTCATTCCTATCAGAGCATAA	1488	0.4019	MDYLALLLISLACVTIHVLVSKLWMKTPTSSKYPPGPRPLPIIGNILQLGNQPHQALTKLSQIYGPIMSLKLGNTNTIVISSPQIAKEVLQKNDQIFSNRKIPDTLRALDHHMFSVAWLPPLTQWRTLRRVCATKVFSSQQLDSTQVLRQRKVQELMDYVEEKCKKGEALDIGEASFTTVLNSISNTFFSMDLAHYTSDESQEFRNIIWGIMEEAGKPNVVDFFPIFRTLDPQGARTRMSSYFGKLIAFFDGLIDERLRLRALENESKPCNDVLDSVLELMLEDDSQVTRPHVLHLFLDLFVAGIDTTSTSIDWVMTELLRNPEKLEKVRKELEQVFVKGKQLDESLISKLPFLQAAVKESFRLHPPVPLLLPHKSGVDAELCGFMVPESAQILVNVWGMGRDSSIWINPDQFMPERFLESGIDFKGRDFELIPFGAGRRICPGLPLASRTVHIVLASLLFTYDWKPIDEDMDISEKCGLSLHKALPLQVIPIRA*	496

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Apr10g1437	495	Pfam	Cytochrome P450	34	482	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Apr10g1437	495	PANTHER	CYTOCHROME P450 FAMILY PROTEIN	1	494	-	-
Apr10g1437	495	PRINTS	P450 superfamily signature	303	320	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Apr10g1437	495	PRINTS	P450 superfamily signature	356	367	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Apr10g1437	495	PRINTS	P450 superfamily signature	433	442	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Apr10g1437	495	PRINTS	P450 superfamily signature	442	453	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Apr10g1437	495	PRINTS	E-class P450 group I signature	61	80	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Apr10g1437	495	PRINTS	E-class P450 group I signature	85	106	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Apr10g1437	495	PRINTS	E-class P450 group I signature	292	309	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Apr10g1437	495	PRINTS	E-class P450 group I signature	312	338	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr10g1437	Apr-Chr10	26726228	26728012	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Apr10g1437	30	494	Cytochrome P450	AT2G45550	48.941	8.73e-168	482

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr10g1437	-		-	gmx:100809483	791.571

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Apr10g1437	10	26726228	26728012	Apr10g1437	10	26726228	26728012	ECH

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