Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1431 ATGCCATCGCGTCCGCCGCCACCGTCTCCTCCCGCGGTGGCCCTCCACCACCGCAACCACCACCGGGAAATAATCCTCTGCGGAGCCATCGCGGCGTCGCTCTTCCTGGTGGCGCTAATAATCTCTGTGACAATCTTCCTCTACCGAAAGCTCTCGTACAACCGAACGGCACCGTTTGAGCACAACCAGCGTCGCTTCTCGTATTCCGTTCTTCGACGAGCAACGAACTCATTCTCACCCTCAACAAAGTTAGGTCACGGAGGGTTCGGTTCGGTTCACAAGGCAACACTACCTTCGGGTCAAACGGTGGCACTTAAAGTGATGGACTCGCCCGGTTCGCTGCAAGGAGAGAGGGAGTTTCACAACGAGTTAACGCTGTGTTCGAATCTTCGTTCTCCTTTTATTCTTTCTCTTCTGGGTTTTTCTTCGGACCGGCGCGGTCGAAAGCTGGTTCTGGTTTATGAGCTTATGCCGAACCGGAGTCTTCAGGACGCGTTATTGGACCGGCGTTGTCCCGAGTTGATGAACTGGGGGAAACGCTTTGACGTTGTCGTTTCGGTGGCTATGGGCCTGGAGTATTTACATCACGGTTGTGACCCGCCTGTGATCCATGGGGATATTAAGCCCAGTAATGTTTTACTGGATCGGGATTTTCGGGCCAAGATTGGGGATTTTGGGCTTGCTAGGGTGAAGACGGTGGAGGATGTGGGAATGGGGATGGTGGAGGAGAAGAAGAAGGAGGAAGGGGTTGTTGAGGAGTGTGGATATGATCGAGGCTCTGCGTTGGAGGAGGTTGAGAGTGTGGTGACTAATACTACTGCAGGCTTTGATGTGGATCGTTCGCCGGAGAGTTGTACAGTCAGGGTTTTGGATTCCGATGCCTCGCCGGAGATGGCGCCGGCGGCGGTGTCGCCCGAGGCGGCGGGGGTGGATAAGTCGAGTGTTTTGTCCGATGGGGGTTTTGATAAGTTCAGCATTGACAGTGGGAATAATCACCGGAAAAAGGGTGGTGGCGGTGGTGGTTCAGGGAGGGATTGGTGGTGGAAGCAAGAGAGTGGGGTAGGGTCTGAATCGGGGAGAGTGAAGGATTATGTGATGGAGTGGATTGGGAGTGAGATAAGGAAGGAGAGGCCGAAGAGTGAGTGGGTTGATTCGTGTTCTTCACATGGTGGGGTGGAAAAGGTTAAGGTTAAGGTGAAGAAGAATCGGAAGCCAAGGGAGTGGTGGAAGGAGGAGTTTTGTGAGGAGCTTGCAAAGAAGAGCAAGAAGAAAAAGAGGAGTCTTGAGGGGGAATCTTGGTGGCAGAAAGATGAGGATGGGGTGGAACAGAAGAGGAAGAGGAAGAGTAAGAGTAGTAGAGGGAGCATTGATTGGTGGTTGGATGGTTTGAGTGGCGAGTTAAGGAATGGGATTGGGAGGAGGAATAGTCAAGATTGGGTTAGTGGGGATATACCAAAGAGTGGTGGAATTAGTAGTACTCCAAGTATGAGGGGAACTGTGTGTTACATTGCTCCTGAGTATGGTGGTGGAGGCCAATTGTCTGAGAAGTGTGATGTGTATAGTTTTGGGGTTCTGCTTTTGGTTTTGGTGGCTGGAAGGAGACCCCTTCAGGTGACGGCGTCGCCGATATCGGAATTTGAGAGGGCTAATCTCATTTCCTGGGCTAGGCAACTTGCTCACAATGGGAGACTTTTGGATCTTGTTGACCCTTCTATTCATTCATTGGATAAGGAGCAGGCATTGCTCTGCATCACCATTGCCTTGTTGTGTCTGCAGAGATCACCAGGGAAGAGGCCTTCCATGAAAGAGATTGTGGGGATGCTCTCTGGTGAGACTGAACCACCACACTTGCCCTTCGAGTTCTCACCATCCCCGCCCTCGAATTTCCTGTTCAAGTCGCGGAAGAAGGCTCGGTGA 1917 0.5222 MPSRPPPPSPPAVALHHRNHHREIILCGAIAASLFLVALIISVTIFLYRKLSYNRTAPFEHNQRRFSYSVLRRATNSFSPSTKLGHGGFGSVHKATLPSGQTVALKVMDSPGSLQGEREFHNELTLCSNLRSPFILSLLGFSSDRRGRKLVLVYELMPNRSLQDALLDRRCPELMNWGKRFDVVVSVAMGLEYLHHGCDPPVIHGDIKPSNVLLDRDFRAKIGDFGLARVKTVEDVGMGMVEEKKKEEGVVEECGYDRGSALEEVESVVTNTTAGFDVDRSPESCTVRVLDSDASPEMAPAAVSPEAAGVDKSSVLSDGGFDKFSIDSGNNHRKKGGGGGGSGRDWWWKQESGVGSESGRVKDYVMEWIGSEIRKERPKSEWVDSCSSHGGVEKVKVKVKKNRKPREWWKEEFCEELAKKSKKKKRSLEGESWWQKDEDGVEQKRKRKSKSSRGSIDWWLDGLSGELRNGIGRRNSQDWVSGDIPKSGGISSTPSMRGTVCYIAPEYGGGGQLSEKCDVYSFGVLLLVLVAGRRPLQVTASPISEFERANLISWARQLAHNGRLLDLVDPSIHSLDKEQALLCITIALLCLQRSPGKRPSMKEIVGMLSGETEPPHLPFEFSPSPPSNFLFKSRKKAR* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1431 638 ProSiteProfiles Protein kinase domain profile. 78 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1431 638 PANTHER OS07G0586332 PROTEIN 1 638 - -
Apr10g1431 638 MobiDBLite consensus disorder prediction 428 448 - -
Apr10g1431 638 ProSitePatterns Protein kinases ATP-binding region signature. 84 106 IPR017441 GO:0005524
Apr10g1431 638 SMART serkin_6 78 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1431 638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Apr10g1431 638 MobiDBLite consensus disorder prediction 428 446 - -
Apr10g1431 638 Gene3D Phosphorylase Kinase; domain 1 43 156 - -
Apr10g1431 638 Gene3D Transferase(Phosphotransferase) domain 1 157 269 - -
Apr10g1431 638 Gene3D Transferase(Phosphotransferase) domain 1 474 614 - -
Apr10g1431 638 MobiDBLite consensus disorder prediction 326 347 - -
Apr10g1431 638 PANTHER OS07G0586332 PROTEIN 1 638 IPR044576 -
Apr10g1431 638 SUPERFAMILY Protein kinase-like (PK-like) 60 625 IPR011009 -
Apr10g1431 638 MobiDBLite consensus disorder prediction 293 313 - -
Apr10g1431 638 Pfam Protein kinase domain 493 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1431 638 Pfam Protein kinase domain 81 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1431 638 MobiDBLite consensus disorder prediction 616 638 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1431 Apr-Chr10 26653703 26656097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1431 486 608 Receptor kinase-like Gene Family AT3G58690 37.209 4.30e-15 75.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Apr10g1431 Pkinase 2.5e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1431 - - gmx:100814933 909.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1431 10 26653703 26656097 Apr10g1431 10 26653703 26656097 ECH