Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1412 ATGGCAGAAGAACCTTCTCAAGACGTTGATCTCCGTTTGGGAGAACCCAAGGGACCCAAAGAGGAACCGGAGACGGAGGAGGGGTCGCCGTCGACGGCCGCAATACGCGTGATGCCGGTGGCGGTTCACGTGCCGGCAGGGATGTCCATGTCCATGCAAGTAAACAAAGCCTTGGCTCAGGCCCAAGCCCAAGCCCAACCACAGAAGAGGGCTTCCACCAAAGACCGTCACACTAAAGTAGAGGGCCGAGGCAGGAGGATCCGAATGCCCGCCACGTGTGCGGCCCGGATCTTTCAACTGACCCGAGAACTCGGTCATAAATCCGACGGCGAAACCATCCGGTGGCTCCTCGAACACGCCGAACCGGCCATCATCGCCGCCACCGGCACCGGCACCGTCCCCGCCATCGCTATGTCCGTTAACGGAACCCTGAAGATCCCAACCACTTCCCCTTCCTCAACCAACAACAACAATAACAATAACAACACCGACCCGGAACCCGGTGACCCACCCGAGAAGAAGAAACGTAAGCGACCCGCGAATAGTGCCTACGTGGACATAAACGACGCCGCCGTTTCGGTCTCGGCGGGGCTAACAACCTCGAACCAAAACGCAGCGACAATTCCCCAACAAAGCGCGATTCCGTTACCGCAAGGCATGGTCCCCATGTGGGCCATACCCTCAAACGCCGTCGTTCCAGCAGCAGGCGCGTTCTTCGTCGTTCCCCAAACGCCGTCGTTTCAGCACCAGCCTCAGTTCTTCACCATAGCTCGACCTATCTCCGCTTTCGTCTCCTCCATGGTCACACCCGTTCAACTCCAACCAACCTCCGCCTCAACAACAACCCCCTCCTCCACCGCTCCAGCGAGAGCCACCGTCATGGCTCCCACCACGACCGCGACCACGACAACCAGCACGACGCAGATGCTCAGAGATTTCTCCTTGGAGATTTACGACAAGCAAGAGCTTCAGTTCATGTCGCGCTCTTCTTCGAAGCATTGA 1002 0.5838 MAEEPSQDVDLRLGEPKGPKEEPETEEGSPSTAAIRVMPVAVHVPAGMSMSMQVNKALAQAQAQAQPQKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMSVNGTLKIPTTSPSSTNNNNNNNNTDPEPGDPPEKKKRKRPANSAYVDINDAAVSVSAGLTTSNQNAATIPQQSAIPLPQGMVPMWAIPSNAVVPAAGAFFVVPQTPSFQHQPQFFTIARPISAFVSSMVTPVQLQPTSASTTTPSSTAPARATVMAPTTTATTTTSTTQMLRDFSLEIYDKQELQFMSRSSSKH* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1412 333 ProSiteProfiles TCP domain profile. 73 127 IPR017887 -
Apr10g1412 333 PANTHER TRANSCRIPTION FACTOR TCP9 19 331 - -
Apr10g1412 333 MobiDBLite consensus disorder prediction 59 83 - -
Apr10g1412 333 MobiDBLite consensus disorder prediction 144 166 - -
Apr10g1412 333 MobiDBLite consensus disorder prediction 144 182 - -
Apr10g1412 333 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 19 331 IPR005333 GO:0003700
Apr10g1412 333 Pfam TCP family transcription factor 72 179 IPR017887 -
Apr10g1412 333 MobiDBLite consensus disorder prediction 1 32 - -
Apr10g1412 333 MobiDBLite consensus disorder prediction 1 27 - -
Apr10g1412 333 MobiDBLite consensus disorder prediction 167 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1412 Apr-Chr10 26369220 26371313 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1412 67 332 TCP Transcription Factor Family AT2G45680 55.195 1.48e-91 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Apr10g1412 TCP 4.1e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1412 - - gmx:100804760 433.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1412 10 26369220 26371313 Apr10g1412 10 26369220 26371313 ECH