Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1398 ATGGTGGAAGCTAGTGAAGATGCGGTTGCAGTTGATGCCCGTTCCACTGAAGACTGGTTGTTACATGCACAGGAATTTATTCCTGTTTCTCTTGCTAAGGCAAGAGAGGTTAAGGGGTTCCCTGGTAGGTGGAAGATGATCGTTTCAAAATTGGAGCAGATTCCATCACGCTTATCGGATTTGTCTAGCCACCCTTGTTTCTCCAAGAATGCTCTTTGCAAGGAGCAATTGCAGGCTGTGTCAAAGACGCTAGAAGAAGCCATTGAATTGGCTGAGTTGTGTGTGAAGGAGAAGTACGAGGGTAAGCTTCGGATGCAAAGTGATCTTGACGCCTTGATTGGGAAACTGGATTTGAATTTAAAGGATTGTGGTCTCCTGATCAAGACGGGTGTGCTCGGTGAGGCTACTTTGCCATTAACTGTGTCAGGTCCTATGGCAGAATCAGATACTTCAACACATGGCAATATAAAGGAACTACTCGCACGCCTTCAGATTGGTCACTTGGAAGCAAAGCACAGAGCTTTAGACAGGCTCTATGAAGTTATGAAAGAAGATGAGCAGAATGTTTTGGCTGTTCTTGGTAGGAGCAACGTTGCTGCTTTAGTTCAATTGCTCACAGCAACATCCCCACGGATAAGGGAGAAGACAGTTACAGTTATATGCTCAATTGTGGAATTGGGGAGCTGTGAAAACTGGCTAGTTTCTGAAGGAGTTCTGCCACCTCTTATAAGACTCGTTGAATCCGGTAGTGTCATGGGTAAAGAGAAGGCTACGGTATCTCTTCAAAGGTTGTCCATGTCAGCAGAAACAACCCGTGCAATTGTCGGACACGGTGGGGTTCGGCCCTTGATTGAGCTTTGTCAAAGTGGTGATTCTGTGACACAGGCTGCTGCTGCTTGTACTCTGAAGAATGTATCGGCTGTTCCTGAGGTGAGACAGATTTTGGCTGAAGAAGGTATTGTAAAGGTTATGATCAATCTCCTTAGTCATGGAATTTTGTTGGGTTCCAAAGAGTATGCAGCAGAGTGCTTGCAGAATCTCACTGCAAGCAATGAGAATCTGAGAAGGTCTGTTATATCAGAAGGCGGTGTTACGAGTCTTTTGACTTATCTTGATGGTCCACTTCCTCAAGAATCTGCAGTTGGAGCATTGAGGAATCTTGTTGGATCAGTTTCTGAGGAAACTTTGGTTTCTCTTGGTTTGATTCCCCGTTTGGTTCACGTGTTGAAGTCCGGATCCTTAGGTGCTCAACAAGCTGCCGCGTCTGTTGTATGCCGCATTTGCAGCTCAATGGAGATGAAGAAAATGATTGGTGAAGCTGATTGCATCTCTCTTCTTATAAAGATGCTTGAGGCTAAAGCAAATACTGCTAGAGAAGTTGCTGCTCAAGCCATTTCAAGCCTAATGGTTCTGTCCCAAAATCGTAGAGAAGTTAAGAAAGATGATAAAAGTGTGCCAAATCTAGTCCAGTTGCTTGATCCAAGCCCACAAAACACTGCGAAGAAATATGCAGTGTCTTGCCTCGGATCACTTTCTTCTAGTAAGAAGTGTAAGAAACTGATGATTTCTTATGGTGCAATTGGGTATCTAAAGAAGCTCACTGAGATGGAAATTCCAGGAGCTAAAAAGCTGCTTGAGCGGTTGGAAAGAGGGAAACTGAGAAGCTTGTTCAGTAGAAAATAG 1683 0.4439 MVEASEDAVAVDARSTEDWLLHAQEFIPVSLAKAREVKGFPGRWKMIVSKLEQIPSRLSDLSSHPCFSKNALCKEQLQAVSKTLEEAIELAELCVKEKYEGKLRMQSDLDALIGKLDLNLKDCGLLIKTGVLGEATLPLTVSGPMAESDTSTHGNIKELLARLQIGHLEAKHRALDRLYEVMKEDEQNVLAVLGRSNVAALVQLLTATSPRIREKTVTVICSIVELGSCENWLVSEGVLPPLIRLVESGSVMGKEKATVSLQRLSMSAETTRAIVGHGGVRPLIELCQSGDSVTQAAAACTLKNVSAVPEVRQILAEEGIVKVMINLLSHGILLGSKEYAAECLQNLTASNENLRRSVISEGGVTSLLTYLDGPLPQESAVGALRNLVGSVSEETLVSLGLIPRLVHVLKSGSLGAQQAAASVVCRICSSMEMKKMIGEADCISLLIKMLEAKANTAREVAAQAISSLMVLSQNRREVKKDDKSVPNLVQLLDPSPQNTAKKYAVSCLGSLSSSKKCKKLMISYGAIGYLKKLTEMEIPGAKKLLERLERGKLRSLFSRK* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1398 560 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 237 279 IPR000225 GO:0005515
Apr10g1398 560 PANTHER ARMADILLO/BETA-CATENIN-LIKE REPEAT PROTEIN 1 560 - -
Apr10g1398 560 SUPERFAMILY ARM repeat 153 539 IPR016024 -
Apr10g1398 560 Gene3D - 333 548 IPR011989 -
Apr10g1398 560 Gene3D - 146 332 IPR011989 -
Apr10g1398 560 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 560 - -
Apr10g1398 560 SMART arm_5 350 389 IPR000225 GO:0005515
Apr10g1398 560 SMART arm_5 185 225 IPR000225 GO:0005515
Apr10g1398 560 SMART arm_5 430 470 IPR000225 GO:0005515
Apr10g1398 560 SMART arm_5 267 307 IPR000225 GO:0005515
Apr10g1398 560 SMART arm_5 308 349 IPR000225 GO:0005515
Apr10g1398 560 SMART arm_5 471 513 IPR000225 GO:0005515
Apr10g1398 560 SMART arm_5 390 429 IPR000225 GO:0005515
Apr10g1398 560 Pfam Armadillo/beta-catenin-like repeat 269 306 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1398 Apr-Chr10 26264061 26266227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1398 310 536 U-box Gene Family AT2G23140 27.586 2.51e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1398 - - gmx:100809488 937.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1398 10 26264061 26266227 Apr10g1398 10 26264061 26266227 ECH