Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1378 ATGCCTCGTGGAACTCTTGAAGTTGTTCTGATCAGTGCCAAGGGCCTCGATGACAATGATTTTCTCTCCAGCGTAGATCCTTATGTGATCCTCACATACCGGACACAGGAGCACAAGAGCACTGTGCAAGAAGATGGTGGATCCAACCCACAGTGGAATGAGAGCTTTCTTTTCACTGTCTCAGACAGCGAGACTGAACTTAATCTAAGGATAATGGATAAAGACAAGTTTAGTCAAGATGATTCTCTTGGCGATGCAACAATTCATTTAGATGCAGTGTTTGAAAATGGTAGCCTTCCAGAAACTGTTTACCAGGTTGTGAAAGGCGAAGATTATTGTGGAGAGATTAAGGTGGCTCTCACTTTTACTGCTGAGAAAAATGTTGATCAGGGGGAATACACTGAACAGAACGAGGGCTATGGTGGATGGAAAGAATCCAGAGAAGAATTTTAA 453 0.4305 MPRGTLEVVLISAKGLDDNDFLSSVDPYVILTYRTQEHKSTVQEDGGSNPQWNESFLFTVSDSETELNLRIMDKDKFSQDDSLGDATIHLDAVFENGSLPETVYQVVKGEDYCGEIKVALTFTAEKNVDQGEYTEQNEGYGGWKESREEF* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1378 150 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Apr10g1378 150 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1 124 IPR035892 -
Apr10g1378 150 Pfam C2 domain 4 97 IPR000008 -
Apr10g1378 150 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 150 - -
Apr10g1378 150 Gene3D C2 domain 2 124 IPR035892 -
Apr10g1378 150 PANTHER C2 DOMAIN-CONTAINING 1 150 - -
Apr10g1378 150 SMART C2_3c 5 102 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1378 Apr-Chr10 26015527 26017494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1378 4 94 C2H2 Transcription Factor Family AT4G21160 35.165 3.63e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1378 - - gmx:100792759 243.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1378 10 26015527 26017494 Apr10g1378 10 26015527 26017494 ECH