Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1374 ATGAAGAAGATCAATGTAATACTCCGCAAGTGCAAGAGCTTGTCTAAGCAACTAGGAAGATCTTCATCATATAGTAGCCTGAGGTCCAAATCTGCTAAGGAAGACTTATGGGCAGGACATGGAATGCAAGATGAAGAAAATTGTGAAACTATATTTGTTGGCAGCACAAGGAAACAGTATATGATCAGCTCCAAGTATCTGAATCATCCACTTCTTAAAGCTTTGATCAACAAGTCAAAGCAAAAGGGCAGTGATGAAAGTGTTTTGGTGGTTAACTGTGAGGTGGTTCTCTTTGATCATCTATTGTGGATGTTAGAGAACGCAGATCCTAAGTTTGGTTATGACTCTTTCGAAGAATTGGCTGAACTCTATGTGTTTTAA 381 0.3885 MKKINVILRKCKSLSKQLGRSSSYSSLRSKSAKEDLWAGHGMQDEENCETIFVGSTRKQYMISSKYLNHPLLKALINKSKQKGSDESVLVVNCEVVLFDHLLWMLENADPKFGYDSFEELAELYVF* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1374 126 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 3 126 IPR003676 GO:0009733
Apr10g1374 126 Pfam Auxin responsive protein 12 105 IPR003676 GO:0009733
Apr10g1374 126 PANTHER EXPRESSED PROTEIN 3 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1374 Apr-Chr10 25997159 25997639 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1374 40 107 Calmodulin-binding Proteins AT5G20810 32.530 5.94e-08 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1374 - - gmx:100527910 199.904