Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1366 ATGATATTCAAATTTGGCAACAGCATGATTAAAGCCTTGGACACCATAACAGCGTCAAATCCAATCAAAGAAACTAAAACACTAAGCTCAAATAACAACATGTTCACACTTGGGTTCTTCAGCCCTCAAAATTCTACAAACCGTTATGTTGGAATCTGGTACTTGGCTAAAACCGCTGTTGTATGGGTGGCTAACAGAAACCAACCACTTAGCGATTCTTCTGGGGTTGCCACAATGTCAGAGAGTGGAAATCTTGTGGTACTAAATGCACAAAAACATGTTTGGTCAACAAATGTGTCATTGTCAAATGTAGCATCTAATGTCAGTGCCAAGCTCTTGGATTCTGGAAACCTTGTACTTCTAGACAATACTTCAGGAAAGACAATGTGGGAGAGTTTCCAACAACCATGTGACACAGCAATTCCAACCTTGAAACTAAGTAAAAATGTGAGAACAGGTGAGGAAGTGAGAATCGCATCATGGAAAAGCCTCTCTGATCCATCATATGGAAGCTTTTCTCTTGGATTGGAAACTGGTAATGTTACTGAGTTGTTCATATGGAATGGAAAACAACCCTTATGGAGGAGTGGTCCTTGGAATGGTCATGTCTTTATTGGGATACCAAACATGATAAGTTTGTTTAGGGATGGTGTTAGTTTGGAAGAAGCTGATGGAACCTTTTACTATTCTTATGGTTATGCAAACAAGCCTTTCTTGAGAATCTATGTTTTAAACCGTCAAGGCAAAGTGGAGAGAAGGCAATGGAATTATGGTAACAAGGAAGAAGTGAGGGGGACAATTCAAGAATCTGAGTGTGATGTTTATGGGATATGTGGCCCATTTGGAATGTGCAACTCTAAGAGTTCACCAATATATAGTTGTTTGAGAGGTTTTGAGCCAAAGAACAAAATTGAATGGAATATGAAAAACTGGAGTAGTAGATGTGAGAGGGTAAAGAATGGATCCAAAGAAGGGAAACCAGATGGGTTTCTGAAGCTGCAGATGGCAAAAGTGCCTAACTTTGCAGGGTGGTCACCTTCTAAGGATGGATTTCCTGCATATGATGGAGATTGTAGAACACCTTGCCTCAATAACTGCTCTTGTATAGCATTTGCATATGATTCAGGTGTTAGCTGCATGTTTTGGAGTACTGATTTACATGATATATCATATGGAGGAGTTGATCTCTACATACGTTTAGCCTACTCTAGCCAGATTTCTAAATACAAGGGGAAGTTAGAAGATGGACAAGAAATGGCAGTTAAACGACTTTCAACAGCATTGCAGGTGATGACAGAATTTTTAAATGAAGTGGAGGTGATTTCTAAGCTTCAACACAGGAATCTAGTTAGGCTTTTTGGCTGCTGCATTGAAGCAGAAGAAAAGATTTTGGTTTATTAGTACATGCCAAACAAAAGCTTGGATTCTTATATCTTTGATTGGGGAAAACGATTTAACATAATTGAAGGAATTGTTCGAGGATTGCTTTATCTTCATAGAGATTCTAGACTACCAATTATACCTAGAGATCTGAAGGCAAGTGACATATTGTTGGATGAAGGGCTTGATACAAAAATATCAGATTTTAGTATGGCTAAAATATTTGGGGACTGTGAAGTGAGGGGAGAAACGAAAAGAATTGTTGGAACATATGGTTACATCTCTCCAGAATATGCAATGCAAGGAATTGTTTGTGATGAGCAATCTGATGTCTTCAGCTTTGGAGTTTTACTACTAGAGATTGTTAGTGAGAGAAAAAACAATGGCAGTCACGAGGATAAAGAATCTCTTACACTTATAGGATTTGCATGGAAATCATGGAACAATAACAACATTATATCTCTAGTAGATCCACAAATATATGATCCAAGGTTTTACAAAGATATACTTAGATGTGTTCACATTGGACTTTTGTGTGCGCAAGAACTTGTGAGAGACAGGCCTATCATGGCCACAGTCATTTCAATGCTTCATAGTGAGATTGTGGATATTCCTCCTCCAAGGCAACTAACATTCATTGAGAGTCAAACATTGTCAAGTACTCTAATGCCAATTCAAAAGGATAAAAGAGTGGTTTGTGGAATATGA 2088 0.3827 MIFKFGNSMIKALDTITASNPIKETKTLSSNNNMFTLGFFSPQNSTNRYVGIWYLAKTAVVWVANRNQPLSDSSGVATMSESGNLVVLNAQKHVWSTNVSLSNVASNVSAKLLDSGNLVLLDNTSGKTMWESFQQPCDTAIPTLKLSKNVRTGEEVRIASWKSLSDPSYGSFSLGLETGNVTELFIWNGKQPLWRSGPWNGHVFIGIPNMISLFRDGVSLEEADGTFYYSYGYANKPFLRIYVLNRQGKVERRQWNYGNKEEVRGTIQESECDVYGICGPFGMCNSKSSPIYSCLRGFEPKNKIEWNMKNWSSRCERVKNGSKEGKPDGFLKLQMAKVPNFAGWSPSKDGFPAYDGDCRTPCLNNCSCIAFAYDSGVSCMFWSTDLHDISYGGVDLYIRLAYSSQISKYKGKLEDGQEMAVKRLSTALQVMTEFLNEVEVISKLQHRNLVRLFGCCIEAEEKILVY*YMPNKSLDSYIFDWGKRFNIIEGIVRGLLYLHRDSRLPIIPRDLKASDILLDEGLDTKISDFSMAKIFGDCEVRGETKRIVGTYGYISPEYAMQGIVCDEQSDVFSFGVLLLEIVSERKNNGSHEDKESLTLIGFAWKSWNNNNIISLVDPQIYDPRFYKDILRCVHIGLLCAQELVRDRPIMATVISMLHSEIVDIPPPRQLTFIESQTLSSTLMPIQKDKRVVCGI* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1366 694 ProSiteProfiles Protein kinase domain profile. 383 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1366 694 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 407 676 - -
Apr10g1366 694 Gene3D Transferase(Phosphotransferase) domain 1 468 662 - -
Apr10g1366 694 SUPERFAMILY alpha-D-mannose-specific plant lectins 50 201 IPR036426 -
Apr10g1366 694 ProSiteProfiles Bulb-type lectin domain profile. 13 133 IPR001480 -
Apr10g1366 694 SUPERFAMILY Protein kinase-like (PK-like) 409 656 IPR011009 -
Apr10g1366 694 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 9 403 - -
Apr10g1366 694 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 407 676 - -
Apr10g1366 694 Pfam D-mannose binding lectin 60 162 IPR001480 -
Apr10g1366 694 CDD PAN_AP_plant 320 401 - -
Apr10g1366 694 Pfam S-locus glycoprotein domain 194 302 IPR000858 GO:0048544
Apr10g1366 694 Gene3D - 8 134 IPR036426 -
Apr10g1366 694 ProSiteProfiles PAN/Apple domain profile. 315 401 IPR003609 -
Apr10g1366 694 CDD B_lectin 19 136 IPR001480 -
Apr10g1366 694 Pfam Protein kinase domain 410 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1366 694 Pfam PAN-like domain 326 389 IPR003609 -
Apr10g1366 694 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 9 403 - -
Apr10g1366 694 SMART blect_4 19 136 IPR001480 -
Apr10g1366 694 Gene3D Phosphorylase Kinase; domain 1 400 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1366 Apr-Chr10 25943992 25947787 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1366 409 672 Receptor kinase-like Gene Family AT4G23150 52.920 5.91e-84 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr10g1366 Pkinase 2.2e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1366 - - aprc:113851101 1400.96