Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1359 ATGAGGCCAACAATGATGCTTAGGGCTCTGAACAAGCAGTTTCTTGGAATTGTTGGTGAAGCTGCAAATACCATTGTTAAGAAGCCAGCAGCACCACTTCCTCCTCCAGTGTCGCACAAACCAGCATTCATTGATGCTTTCCTGTACAAGATGAAGAAGAACCCAAAGCTTTTGGCAAACAAGACCATTTGGTCACGGAGATCCACTATCTTGCCGGAATTTGTTGATTCCACTGTCAAGATTTACAATGGGAAAACCACTATTCGTTGTAAGATCACTGAGGGAAAAGTGGGTCATAAGTTTGGAGAGTTTGCTCTCACCAGGAAACGCAAAACCAGAGAACAAGCCAATGCCAAAAATGTTAAACAACTTAAGAAAAAGAAGTGA 387 0.4238 MRPTMMLRALNKQFLGIVGEAANTIVKKPAAPLPPPVSHKPAFIDAFLYKMKKNPKLLANKTIWSRRSTILPEFVDSTVKIYNGKTTIRCKITEGKVGHKFGEFALTRKRKTREQANAKNVKQLKKKK* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1359 128 ProSitePatterns Ribosomal protein S19 signature. 83 107 IPR020934 GO:0003723
Apr10g1359 128 PANTHER 40S RIBOSOMAL PROTEIN S19, MITOCHONDRIAL 38 123 - -
Apr10g1359 128 Pfam Ribosomal protein S19 50 111 IPR002222 GO:0003735|GO:0005840|GO:0006412
Apr10g1359 128 PANTHER RIBOSOMAL PROTEIN S19P FAMILY MEMBER 38 123 IPR002222 GO:0003735|GO:0005840|GO:0006412
Apr10g1359 128 PRINTS Ribosomal protein S19 family signature 63 82 IPR002222 GO:0003735|GO:0005840|GO:0006412
Apr10g1359 128 PRINTS Ribosomal protein S19 family signature 83 95 IPR002222 GO:0003735|GO:0005840|GO:0006412
Apr10g1359 128 PRINTS Ribosomal protein S19 family signature 95 110 IPR002222 GO:0003735|GO:0005840|GO:0006412
Apr10g1359 128 Hamap 30S ribosomal protein S19 [rpsS]. 6 119 IPR002222 GO:0003735|GO:0005840|GO:0006412
Apr10g1359 128 MobiDBLite consensus disorder prediction 108 128 - -
Apr10g1359 128 Gene3D 30s Ribosomal Protein S19; Chain A 37 122 IPR023575 GO:0003735|GO:0005840|GO:0006412
Apr10g1359 128 SUPERFAMILY Ribosomal protein S19 39 112 IPR023575 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1359 66 109 Cytoplasmic Ribosomal Protein Gene Family AT5G09490 38.636 9.36e-06 40.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1359 K02965 - gmx:100305608 197.593