Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1358 ATGGATATAGCTTTTAGCTTATCACGGTCCCGTGTAGTATTGGATGGTTTTGATTCTTGCAATATGTTTGGAGGGGGAGGTTTTGGTTGTGCTTTTCTTGGCAACTCGAGGACTATTCTGAAAGCTCGTTTTAGTGGTATGAACAAGATAGGTAGTAGGAGTAATTCAAGAGTGGTATGTGTTGGAGAATTCAAAGTTTCAAATGGGATGAGGAGTTTGTCATGGAAGAATAATAAAATTTGTAGGGGAAGTAGGGAAATTTGGTTTAAGTGTCAGGGGAATGATTCTTTAGCATATGTCAATGGCAATGGACGGAATGTTGATGATGTGAAAGGTGCAGATGGGGACTCTGATTTGAGGTCCATTTCCAGTGCTGAATTGAGTGAACCTTTTGGAGAAGAAAAAGAAGGGCAAGGAGGGAGGAAAGAATTAGAGGTAGAGGTACAAAATGTGGATGAATTGAAAGAACTGTTGCAGAAGGCCATAAAAGAACTAGAAGCTGCTCGAGTAAACAGTATTGTGTTTGAGGAAAAGGTTAAAAAGATAGCAGAGACTGCTATTTTTTTGCAGGATGAAGCTGCAAGTGCTTGGAACAATGTTACTTCTACCCTTGATACCATCCAAGATATTGTGGGTCAAGAATTTGTTGTCAAAGAAGCTGTTCAGAAAGCAACAATGGCTCTTTCTCTGGCTGAGGCAAGGCTTCAAGTAGCCATAGAATCTCTGGAGGTTGTGAAAGAAGTTTATGATTCCCCACAAGGTTCTGACAAGAGAAATGGTGATAAGGATATAACACAAGAGAAGAAAGAACTTTTGGTTGCCCAGGAAGATATCAGGGAGTGTCAGACAAATTTAGCAAATTGTGAGGCTGAGCTGAGGTGCTTACAAAGTAGAAAGGAGGAGTTGCAGAATGAAGTGAATCAATTGCATGAAATTGCAGAACAGGCCCAGCTGAAAGCAGGGAAAGCGGAAGAAGATGTCACAAACATAATGTTTTTGGCAGAGCAAGCTGTTGCCGTTGAACTTGAGGCTGCACAACATGTGAATGATGCAGAAATTGCATTACTGAAAGCAGACAAGTCTGCATCTAGTTTTAATTCTGATACCAAAGACACTCTACAAGTACAAGATGTTGTGGCCATTCCTGAGGAGGAGAATGTGGTTCAAAGTTTTTCTAGTGATAATGCTGATAAAAGAGAGGTTGATTTCTCTATTGGTGATGAACCTTTGCTTGCCATGCGATCACCAGAAACACAATCCGATAAAAGCAGCCAAAGTATAGAAGACATGATGCAGTCTGATTATCTGAGTGATCATGAGAATGGACAGTTAAACCTAGACTCTTCTAGAGAAACTGAAGTCGAAAAAGACAAGTCAAAAATTGTAGTTCAAACAAAAAAGCAGGAAACACAGAAAGATTTGAGTAGAGATAATTCACCAATTGCTCCCAAGACATTATTGAAGAAGTCTTCCCGATTTTTTCCAGCATCATTCTTCTCTTTTACTGCAGATGAGACTGAATACAAACCAGCATCAGTTTTCCATGGTCTTGTGGAGTCTGCACAGAAGCAGTTAGCCAAGCTGGTTCTTGGGTTACTGTTAATTGGAGCAGGGGTTGCGTTCTATGCCAATAGAGCAGAGAGGAGTGCTCAACTACTTCAGCAGCCAGAAGTCATTGCAACCACTGTTGAAGAAGTTTCTTCAAGTGCAAAGCCTCTGGTTAGACAATTTCAGGAGCTTCCTTGGAGAATTAAGAAAATTATCACATCATTACCTGATCAAGAGGTTAGTTTTTCTTGTTCTTATGTAAATGAGGAGGAAGCCTCCCTCTTTGACATGCTCTGGTTACTACTTGCAAGTGTTGTATTTGTCCCGATATTTCAAAAGATTCCTGGAGGGAGTCCTGTTCTTGGCTACTTGGCTGCTGGTATCTTGATTGGGCCTTATGGTCTCTCCATCATTCGTCATGTTCATGGGACAAAAGCAATAGCTGAGTTTGGAGTTGTTTTCTTGTTATTCAATATTGGCCTAGAGCTCTCTGTTGAAAGGCTTAGTTCAATGAAGAAATATGTCTTTGGATTAGGCTCTGCTCAGGTTTTGGTGACTGCTGTAGTTGTTGGCTTAGTGGCTCATTATATTTGTGGCCAAGCTGGTCCTGCTGCTATTGTCATTGGGAATGGCCTGGCATTATCATCAACTGCTGTTGTTCTGCAGGTGTTACAGGAGAGAGGGGAGAGCACATCACGGCATGGAAGAGCTACATTTTCTGTTTTGCTCTTTCAGGATTTGGCTGTTGTTGTCTTGCTAATACTCATACCTCTTATTTCACCTAATTCTTCCAAAGGAGGGGTTGGTTTTCAAGCCATTGCTGAAGCTCTTGGTATGGCAGCTGTTAAGGCAGCGGTTGCCATCACAGCCATAATTGCAGGTGGACGATTGCTCCTTCGACCCATATATAAGCAGATTGCTGAAAATCAAAATGCAGAAATATTTTCTGCCAATACCCTCTTTGTTATTCTTGGGACTAGCCTTCTCACAGCCAGGGCTGGACTTTCCATGGCACTGGGGGCATTTTTGGCTGGTTTACTACTGGCAGAAACTGAATTTTCCTTACAGGTTGAATCTGATATTGCTCCATATCGTGGCCTTCTACTGGGTGTCTTCTTTATGACGGTTGGAATGTCAATTGATCCAAAACTTTTTGTTTCAAACTTTCCAGTCGTTACAGGGACACTGGGACTCTTAATATGTGGCAAGACTTTGTTGGTTACTTTGATTGGCAGAATTTTTGGTATTTCTCTCATTTCTGCCATTAGGGTTGGTCTTCTTCTTGCTCCTGGGGGAGAGTTTGCGTTTGTGGCTTTTGGTGAAGCTGTTAATCAGGGCATAATGTCTTCCCAGTTGTCCTCTTTGCTGTTTCTTGTTGTGGGAATTTCAATGGCCCTCACTCCATGGCTAGCTGCAGGAGGCCAGCTACTTGCTTCCCGCTTTGAGCTGCATGATGTTCGAAGTTTATTACCTGTAGAAAGTGAGACAGACGATTTGCGAGATCATATCATTATTTGTGGATTTGGGCGAGTTGGGCAGATCATTGCACAACTTCTTTCTGAGCAACTTATTCCTTTTGTTGCACTAGACGTGAGAAGTGATAGAGTGGCAATTGGGCGCTCCCTGGATCTCCCTGTGTACTTTGGAGATGCTGGTAGTCGAGAGGTCTTACATAAGGTTGGGGCTGAAAGGGCAAGTGCTGCTGCAGTAACTTTAGATTCGCCCGGAGCGAATTATAGAACAGTATGGGCTCTGAGCAAGCACTTCCCAAATGTGAAGACTTTTGTTCGTGCACATGATGTTGATCATGGATTGAATTTAGAGAAGGCTGGAGCTACCGCTGTTGTCCCAGAGACATTGGAACCAAGTCTTCAACTAGCAGCTGCCGTGCTTGCTCAGGCTAAACTTCCTACGTCGGAGATTGCAGCAACTATAAACGAGTTCAGATCCCGCCATCTGGCTGAGCTCACAGAACTATCTGAAACAAGCGGAAGTTCTTTTGGATATGGATATAACAGAGTTATGAGCAGACCCAAATCTCAAACCATAGATTCATCAGATGATACCCAATTCTCTGGAGGGAAACTGGCGACATGA 3645 0.4261 MDIAFSLSRSRVVLDGFDSCNMFGGGGFGCAFLGNSRTILKARFSGMNKIGSRSNSRVVCVGEFKVSNGMRSLSWKNNKICRGSREIWFKCQGNDSLAYVNGNGRNVDDVKGADGDSDLRSISSAELSEPFGEEKEGQGGRKELEVEVQNVDELKELLQKAIKELEAARVNSIVFEEKVKKIAETAIFLQDEAASAWNNVTSTLDTIQDIVGQEFVVKEAVQKATMALSLAEARLQVAIESLEVVKEVYDSPQGSDKRNGDKDITQEKKELLVAQEDIRECQTNLANCEAELRCLQSRKEELQNEVNQLHEIAEQAQLKAGKAEEDVTNIMFLAEQAVAVELEAAQHVNDAEIALLKADKSASSFNSDTKDTLQVQDVVAIPEEENVVQSFSSDNADKREVDFSIGDEPLLAMRSPETQSDKSSQSIEDMMQSDYLSDHENGQLNLDSSRETEVEKDKSKIVVQTKKQETQKDLSRDNSPIAPKTLLKKSSRFFPASFFSFTADETEYKPASVFHGLVESAQKQLAKLVLGLLLIGAGVAFYANRAERSAQLLQQPEVIATTVEEVSSSAKPLVRQFQELPWRIKKIITSLPDQEVSFSCSYVNEEEASLFDMLWLLLASVVFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLVTAVVVGLVAHYICGQAGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGMAAVKAAVAITAIIAGGRLLLRPIYKQIAENQNAEIFSANTLFVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGVFFMTVGMSIDPKLFVSNFPVVTGTLGLLICGKTLLVTLIGRIFGISLISAIRVGLLLAPGGEFAFVAFGEAVNQGIMSSQLSSLLFLVVGISMALTPWLAAGGQLLASRFELHDVRSLLPVESETDDLRDHIIICGFGRVGQIIAQLLSEQLIPFVALDVRSDRVAIGRSLDLPVYFGDAGSREVLHKVGAERASAAAVTLDSPGANYRTVWALSKHFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPTSEIAATINEFRSRHLAELTELSETSGSSFGYGYNRVMSRPKSQTIDSSDDTQFSGGKLAT* 1215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1358 1214 Gene3D - 606 992 IPR038770 -
Apr10g1358 1214 Gene3D - 1015 1178 - -
Apr10g1358 1214 MobiDBLite consensus disorder prediction 406 481 - -
Apr10g1358 1214 Pfam Sodium/hydrogen exchanger family 615 986 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Apr10g1358 1214 MobiDBLite consensus disorder prediction 416 443 - -
Apr10g1358 1214 PANTHER K(+) EFFLUX ANTIPORTER 1, CHLOROPLASTIC-RELATED 1 1213 - -
Apr10g1358 1214 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1015 1156 IPR036291 -
Apr10g1358 1214 TIGRFAM 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 617 897 IPR004771 GO:0006812|GO:0008324|GO:0016021
Apr10g1358 1214 MobiDBLite consensus disorder prediction 444 474 - -
Apr10g1358 1214 Coils Coil 264 326 - -
Apr10g1358 1214 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 1 1213 - -
Apr10g1358 1214 ProSiteProfiles RCK N-terminal domain profile. 1018 1140 IPR003148 GO:0006813
Apr10g1358 1214 Pfam TrkA-N domain 1019 1132 IPR003148 GO:0006813
Apr10g1358 1214 MobiDBLite consensus disorder prediction 1194 1214 - -
Apr10g1358 1214 Coils Coil 141 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1358 Apr-Chr10 25888664 25900402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1358 91 1213 Inorganic Solute Cotransporters AT4G00630 69.596 0.0 1399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1358 - - gmx:100791174 1904.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1358 10 25888664 25900402 Apr10g1358 10 25888664 25900402 ECH
Apr4g2212 4 31146660 31160725 Apr10g1358 10 25888664 25900402 PCT