Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1343 ATGGGTATTCAGTGCTCCAGACTCATCCCATGTTGTGTGGATTCACAAGTTAAGGCATCTGTTATTGAAACTCCAGATGCCGAAAATGAGGATAGAAGTGAGGTCAGTAACTGGCCCACGTTCCGTGAATTTACACTTGAGCAACTTAAGAATGCAACATCTGGTTTTGCTGTTGAGAATATTGTATCTGAACATGGAGAGAAAGCTCCAAATGTTGTTTATAAGGGGAAGCTGGAGAATCAAATGAGGATTGCTGTTAAGCGGTTTAATAGGAATGCCTGGCCTGATTCTCGGCAGTTTTTGGAGGAAGCAAGATCAGTTGGTCAGCTTCGTAATCAAAGATTGGCAAATTTGCTTGGTTGCTGTTGTGAAGGAGATGAGAGGTTGCTTGTGGCAGAATATATGCCCAATGAAACACTTGCAAAGCACCTTTTCCATTGGGAAACACAACCTATGAAATGGGCAATGCGACTAAGAGTTGTTCTACATCTTGCACAAGCTCTAGAGTACTGCACAAGTAAAGGGCGCGCTCTCTATCATGACCTTAATGCATATAGAGTTCTTTTTGATGAGGATGGTAATCCTAGGCTTTCTAGTTTTGGTCTTATGAAAAATAGCAGGGATGGGAAAAGTTATAGCACAAATTTGGCATTTACCCCTCCAGAGTATCTCAGAACTGGGAGAGTAACACCAGAAAGTGTAATATATAGCTTTGGCACACTTTTGCTTGACCTTCTCAGTGGGAAGCATATACCCCCAAGTCATGCCCTTGATGTAATTCGTGGCAGAAATCTTCAGATGCTGACAGATTCTTGTTTGGAAGGACAGTTTTCTGATGATGATGGAACTGAGTTGGTACGCTTGGCATCTCGATGTTTACAGTATGAACCTAGAGAACGCCCTAATCCAAAATCATTGGTGGCTGCTTTGGCTTCTCTTCAGAAGGAAACAGAGGTTCCTTCACATGTCTTGATGGGCATCCCACATAGTGCTACTTTTGCTTCATTATCTCCTCTTGGTGAAGCATGCACAAGAAAGGATTTGACTGCCATACATGAAGTTTTAGAAAATATTGGCTATAAAGATGATGAAGGAGTTGCAAATGAGTTATCATTCCAGATGTGGACTGATCAAATGCAGGAAACATTAAATTGTAAGAAAAAGGGGGATGTTGCTTTCCGGCAGAAAGATTTTAGACTAGCGATTGAGTGCTACTCACAGTTCATTGATGCTGGAACAATGGTTTCTCCAACAGTCTATGCCCGGCGCAGTTTGTGTTATCTCATAAGCGACATGCCTCAGGAAGCACTGAACGATGCAATGCAGGCACAAGTGGTTTCCCCCGTGTGGCACATTGCATCTTATCTTCAATCTGTTGCCCTTGGAGGACTTGGGATGGAGAATGAAGCCCAAGCAGCTCTTAAAGAGGGCACAACACTGGAATCTAAGCGAAATGCGACTACCAAACAAAAGTGA 1476 0.4282 MGIQCSRLIPCCVDSQVKASVIETPDAENEDRSEVSNWPTFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQMRIAVKRFNRNAWPDSRQFLEEARSVGQLRNQRLANLLGCCCEGDERLLVAEYMPNETLAKHLFHWETQPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRVLFDEDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDVIRGRNLQMLTDSCLEGQFSDDDGTELVRLASRCLQYEPRERPNPKSLVAALASLQKETEVPSHVLMGIPHSATFASLSPLGEACTRKDLTAIHEVLENIGYKDDEGVANELSFQMWTDQMQETLNCKKKGDVAFRQKDFRLAIECYSQFIDAGTMVSPTVYARRSLCYLISDMPQEALNDAMQAQVVSPVWHIASYLQSVALGGLGMENEAQAALKEGTTLESKRNATTKQK* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1343 491 Gene3D Tetratricopeptide repeat domain 380 491 IPR011990 GO:0005515
Apr10g1343 491 PANTHER LRR RECEPTOR-LIKE KINASE 1 490 - -
Apr10g1343 491 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 490 IPR045845 GO:0004672|GO:0009742
Apr10g1343 491 Pfam Protein tyrosine and serine/threonine kinase 72 309 IPR001245 GO:0004672|GO:0006468
Apr10g1343 491 Gene3D Transferase(Phosphotransferase) domain 1 136 328 - -
Apr10g1343 491 Gene3D Phosphorylase Kinase; domain 1 29 134 - -
Apr10g1343 491 ProSiteProfiles Protein kinase domain profile. 59 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1343 491 SUPERFAMILY Protein kinase-like (PK-like) 31 320 IPR011009 -
Apr10g1343 491 SUPERFAMILY TPR-like 383 481 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1343 Apr-Chr10 25743827 25750367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1343 29 313 Glycoside Hydrolase AT3G07070 33.866 3.62e-44 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Apr10g1343 PK_Tyr_Ser-Thr 3.9e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1343 K14500 - gmx:100799260 954.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1343 10 25743827 25750367 Apr10g1343 10 25743827 25750367 ECH