Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1334 ATGCACAAGAACCTAAGCACTCAACTAGCTGTTGCAGTGAGAAGTATTCAGTGGAGCTATGGAATTTTCTGGGCACCTTCAACCACTCAACAAAGGGTATTGGAATGGAGGGATGGATACTATAATGGAGACATTAAGACAAGAAAAACAGTACAAAGCATGGAAATGAAGGCTGATAAAATAGGCTTGCAAAGGAGTGAACAACTGAAGGAACTATATGAGTTTCTTCTTGTAGGTGAAGCTGACACACAAACCAAAAGGCCTTCTGCTGCATTAGTTCCAGAAGATCTCTCAGATTCAGAGTGGTATTACTTGGTTTGCATGTCCTTTGTCTTCAATGACAACCAAAGTTTGCCTGGAAGAGCACTAGAAATTGGTGACACTGTGTGGTTATGCAATGCTCAACATGCGGATAACAAAGATTTCTCTCGTTCCTTGCTTGCGAAGAGTGCGTCAATTCAGACAGTGGTGTGTTTTCCCTATCAAGGAGGTGTTATTGAGATAGGCACAACTGAACTGGTTGCTGAGGATCCTAATCTCATACAACATGTTAAGGCTTGCTTCTTAGAAATCTCAAAGCCTATTTGCTCTGATAAGTCCTCATCTACTCTCGATAAACCTCATGATGACAAATATCCAACATGCACCAAAGGTGATCCTAGGATATTAGATACAATGACTTTGGAAAACTCATGTTCACATGAAGAAGAAATCAAATTTGATCATGATCCTATCAATGAATTTCATGATGATGACAATGAAGATTCTAACGCTATGGACGAATCAATGATTGAGGGCATTAATGGTGGGCACTCTCAAGCTCAATTTGTGAATGATGCCTTGATCATTGGTGCCCCAGATTCCCTTAGTTCTTGTGATTGTATGCATGAAGCTTCTGAGAAGCAAGGCAGGGCTTCCAAGAGTGTAAGCCAAGTTCAACTAAGGGAATTTCAAGATTGTAATCACTCAAACAGAAGCTTTTTGGATACTGGAGCAGATGAAGACTTGTATTACACAAGAACACTTTGTGCTGTTCTGGGAAATTCATCAATTTTTAAACCAAAGCCATGTGCTGGTGACTCAAATTATAAATCTAGTTTTGTGAAATGGAATAAAGAAACAGTTTCTGCATGGAAGGGACCGAGGTTTCAACAAAGCATGTTAAAGAAGACTTTGTTAAAGGTCCCTTTTATGCATAGAAATTGCTCCTCTCTCAAGTCACAGAAAGAAAATGAGAGAATGAAATGGACTAGTAAATTGGAAAATACTGATAGTTTCATGGGAAATGCCTTCTCTGATAAAAAATTAGAACTTAAAAGCTATGAGGTGGATAAGATTTCAATTCTAGGAGACACAATTAAGTACTTGAAAGAGTTAGAGACAAGAGTAGAAGAGCTAGAATCTTATATGAATATTGCTGATTCTGAAGCAAGAACCAAAAGAAAATGTCTTGATGTACTAGAGCAGATGTCAGATAATTATGGTGCCAGAAAGATTTGCATGGGAATGAAACCTTGGATAAACAAGAGGAAGGCTTGTGATATAGATGAGATAGACACAGATATAGATAGAGTTGTTTCTGAAGAAGCTAAGTCACTGGATGTTAAAGTCAACATGAAGGAGCAAGAGGTTCTGATTGAGATGAAATGTCCTTACAGGAAACACGTATTGTATGATATCATGGATACCATTAACAATCTGCATTTAGATGCTCACACGGTTGAATCATCAACATTTGATGGTGTTTTCACATTGACACTTAAAACTAAGTTTCGAGGAGCAGCAACAGCACCCATTAGGATGATCAAAGAAGCACTTTGGAAAGTATCTGGAAATATTTGA 1842 0.3822 MHKNLSTQLAVAVRSIQWSYGIFWAPSTTQQRVLEWRDGYYNGDIKTRKTVQSMEMKADKIGLQRSEQLKELYEFLLVGEADTQTKRPSAALVPEDLSDSEWYYLVCMSFVFNDNQSLPGRALEIGDTVWLCNAQHADNKDFSRSLLAKSASIQTVVCFPYQGGVIEIGTTELVAEDPNLIQHVKACFLEISKPICSDKSSSTLDKPHDDKYPTCTKGDPRILDTMTLENSCSHEEEIKFDHDPINEFHDDDNEDSNAMDESMIEGINGGHSQAQFVNDALIIGAPDSLSSCDCMHEASEKQGRASKSVSQVQLREFQDCNHSNRSFLDTGADEDLYYTRTLCAVLGNSSIFKPKPCAGDSNYKSSFVKWNKETVSAWKGPRFQQSMLKKTLLKVPFMHRNCSSLKSQKENERMKWTSKLENTDSFMGNAFSDKKLELKSYEVDKISILGDTIKYLKELETRVEELESYMNIADSEARTKRKCLDVLEQMSDNYGARKICMGMKPWINKRKACDIDEIDTDIDRVVSEEAKSLDVKVNMKEQEVLIEMKCPYRKHVLYDIMDTINNLHLDAHTVESSTFDGVFTLTLKTKFRGAATAPIRMIKEALWKVSGNI* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1334 613 Coils Coil 456 476 - -
Apr10g1334 613 PANTHER TRANSCRIPTION FACTOR TT8 3 611 - -
Apr10g1334 613 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 188 IPR025610 -
Apr10g1334 613 PANTHER TRANSCRIPTION FACTOR MYC1 3 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1334 Apr-Chr10 25682432 25687092 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1334 4 610 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 38.231 1.92e-123 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1334 - - gmx:100798122 974.156
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1334 10 25682432 25687092 Apr10g1334 10 25682432 25687092 ECH