Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1328 ATGGCTAAGAAGTCCCAAAAACGCCTTGTGCGGTATGAGAAAGATAAGTCAGGCTGCATGTGGGGTTTTATTAGTATGTTTGATTTTCGCCATGGTCACTCCACTAGGAAGATGATTGCGGATAAGAGGCGTAGCAGCAAACATGCTGTTGGTGTTTTACATTCTAAGAACAAGCTTGAGATGTCGAGCAATTTGGATGAAGTTTGTCAAGGCAATGCTGACATTGGAGAGAGTAAACGACCATCGGTGATTAAGCCTAGCGTGAAGAAGCTCATAGAAGAAGAGATGTTCATGGACCGTAATGCAATGAAGGATTCAAATAATGCTGAAACAGAATCAAAGGAATCTAGATTAAGGCGTGAAGTTCTTGTGAAGTTAGATTCCAAGAGGAAAAATAAATCATGCAAGAAAAACCATGATATGGACACCAACGATTTAAATTTGAATCCAACCTTGAAATCTGAAATTGCACATAATCAGCACTCAAGGAAGCAATCTAAAGATAATCTTGATCTGGATAAGATAATTGAAGAGTTTTGTCACCTAAAAGATGCTCGTTCCATGATGCATGGGAAAGATGGAGAAGAAATTCTTGCACAACCAAACCATAAGCAAACTATTTCTGAAAACAATGCAAGAGATGCGATTCTAGAATTGGTGAATCAGATGATATTGAATGGCAAAGATCTGGCAGAAGCTAGAAGATTTCTTTGCTCCCATCAACTCATGGAAGCTCTACAAATTATAAGTTCAGATAAGGAATTGTTTCTTTCACTTCTACATAACCCAAATTCACTTTTATTCAAATGTGTTCAAGAGTTTAGGAGTTCTGAAGGGACAAATGACAAAGAATATGGTTGTATCACCGGTTCCAACTTCTCTGAACAAGATCATGGCCATATTGAACAAACTAGGGAGATTGTCAACCACAAGAAGCACAACTTTTTCAGGAAAAAGGTGAAGTCTCAATCAAAAAGTTCAACAGATGAAAATGGGAATACTGACTTGTCAAGTAGAATTGTTATTCTGAAGCCTGGGCAAATGGGTTTGCAAAAATCTGACCCTGAAAGCAACCTTGCCTCATTGCAAACTTCTCACGATTCTGTCAAATACAATGCCCCTTCTGTGAGAGGCAGTTCACATTTTTCTCTTACAGAGATAAAAAAGAAACTAAAGCATGCTATGGGAAGGGACAGACATGGAAACCCTGAAGGGATCTCAACAAGACACACTGCTGAATATCAAAATAAGGTACGCAGCAGCAAAGCCATTGGTAAAGACAATCTTGGAATGAGATCTCCTAGTAAAGATCATTTCTTCATTGAAAAAATTGCTAGACCTACAGCTGGTGTTATGAAAGGAGACAAGATTGGTACAATTAGAGATTCTGAATTGACTAGGGAACATGAAAACGGTAGTTATCCCAAACAAAGGGTTTCTAGCTTATATATTGAGGCTAAGAAACATCTGAGTGAGATGGTAGGTAATGGAGATGAGAATATAGACTTGTCAAGTAGGCAAATTTCCAAAACCCTTGGGAGAATACTATCACTTCCAGAGTATAACTTTTCTCCCCTTGGCAGTCCTGGAAGGGATTGGGAGCAACATTTTGTGACTGCACAGACAAGATTTTCTACTTCAGATAGAAATTGGGAGGCTAATAAGGATAATGTGTCTTCAAAACAAGGAAACTTTGTTGGTCATTTGGATCAAGAAACAGACAAAGACAATGCAGAGAAGAAGTCAAGCATTTGTGATGAAAGCTCCAATAATGAAGTACCAGAAGTTAAGTCTGACTCAGATCATGCTGACAAAGTGGAAAATTGTGGTCCTATTAGAGATGAGATAGTTCCTGAAGGTGAGATAGAATCTGCAAAAGAGAGAGATGTTTTGGAATCTTCCTCAGAAGCAGTTGTCCTTGGTGCAGGAAAAGAGAACCAAAACTATGATATATCAGAAATTCCTGATAGTGCAAGATGTGTTCAATGTTTGAAGCAGGATGTAACAGAAGAAAGCAAACCATCATCTCCACTGTTGTCCCCCTCTCACTTTTCCACCACTAAGAAAATTGAAGAGCTAGAAAATGTTACAGATGTATCTTCACGGCCAAGTCCTGTATCAGTTCTTGATACACCATTCGTAGAGGATGGTGCCAGCCCTGGGTACTCTGGACCTCAACCTGTAGAAGTACCTGTACAGCCAATACATATTCAATTTGAAGAACAAGACTCTTCACCTGTGAATCAAATTAACAGAGAAAAATATTGTCTTGAAGAAAATGAATTACTATATGACTACATCAAAGCAGTCCTACAAGCCTCTGGGTTGACCATAGATCAATTGTTGATGAAATGCCTTTCCTCAGACAAGATACTAGATCCTTCCTTGTTTGATCAAGTAGAGTTCTTATCAAGCCAACTTTGCCATGATCAGAAGCTCCTATATGATGGTATCAACGAAGTTCTCATGGAGGTTTGTCATAATTACTCTGTGGTCTCACCTTGTGTGTCATTTGTAAATCCTGGCATAAGGTCTACTCCAAATATAAAAAGGGTTATTCTCAAGGTTTGGGAAGGAATATATTGGCATGTCCTTCCCTTGCCCCCACCACGTTCCTTGGACAAAATTGTTAGGAAAGATATGGAAAAAAGTAGGGCATGGATGGACCTCAGATTTGAAGCCGAAACAGTTGGTTTTGAAATGGGAGAAGCCATTCTAGCAGAACTGATGGAAGATACAATACTAAACTGTGTAAGCAAAAGTACACAGAGTGAATGTTCTCAACTTCAAATTGAATACAAGGACACTGAAAACAGCACCAGTGTGTAA 2829 0.3892 MAKKSQKRLVRYEKDKSGCMWGFISMFDFRHGHSTRKMIADKRRSSKHAVGVLHSKNKLEMSSNLDEVCQGNADIGESKRPSVIKPSVKKLIEEEMFMDRNAMKDSNNAETESKESRLRREVLVKLDSKRKNKSCKKNHDMDTNDLNLNPTLKSEIAHNQHSRKQSKDNLDLDKIIEEFCHLKDARSMMHGKDGEEILAQPNHKQTISENNARDAILELVNQMILNGKDLAEARRFLCSHQLMEALQIISSDKELFLSLLHNPNSLLFKCVQEFRSSEGTNDKEYGCITGSNFSEQDHGHIEQTREIVNHKKHNFFRKKVKSQSKSSTDENGNTDLSSRIVILKPGQMGLQKSDPESNLASLQTSHDSVKYNAPSVRGSSHFSLTEIKKKLKHAMGRDRHGNPEGISTRHTAEYQNKVRSSKAIGKDNLGMRSPSKDHFFIEKIARPTAGVMKGDKIGTIRDSELTREHENGSYPKQRVSSLYIEAKKHLSEMVGNGDENIDLSSRQISKTLGRILSLPEYNFSPLGSPGRDWEQHFVTAQTRFSTSDRNWEANKDNVSSKQGNFVGHLDQETDKDNAEKKSSICDESSNNEVPEVKSDSDHADKVENCGPIRDEIVPEGEIESAKERDVLESSSEAVVLGAGKENQNYDISEIPDSARCVQCLKQDVTEESKPSSPLLSPSHFSTTKKIEELENVTDVSSRPSPVSVLDTPFVEDGASPGYSGPQPVEVPVQPIHIQFEEQDSSPVNQINREKYCLEENELLYDYIKAVLQASGLTIDQLLMKCLSSDKILDPSLFDQVEFLSSQLCHDQKLLYDGINEVLMEVCHNYSVVSPCVSFVNPGIRSTPNIKRVILKVWEGIYWHVLPLPPPRSLDKIVRKDMEKSRAWMDLRFEAETVGFEMGEAILAELMEDTILNCVSKSTQSECSQLQIEYKDTENSTSV* 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1328 942 MobiDBLite consensus disorder prediction 126 148 - -
Apr10g1328 942 Pfam Protein of unknown function (DUF3741) 221 265 IPR022212 -
Apr10g1328 942 MobiDBLite consensus disorder prediction 568 608 - -
Apr10g1328 942 MobiDBLite consensus disorder prediction 126 143 - -
Apr10g1328 942 PANTHER (, RELATED) 1 930 - -
Apr10g1328 942 MobiDBLite consensus disorder prediction 548 567 - -
Apr10g1328 942 Pfam Domain of unknown function (DUF4378) 765 912 IPR025486 -
Apr10g1328 942 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 930 - -
Apr10g1328 942 MobiDBLite consensus disorder prediction 548 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1328 Apr-Chr10 25627266 25633267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1328 1 900 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 33.804 2.47e-112 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1328 - - gmx:100780609 1365.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1328 10 25627266 25633267 Apr10g1328 10 25627266 25633267 ECH
Apr4g2236 4 31361786 31368123 Apr10g1328 10 25627266 25633267 PCT