Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr10g1317 | ATGTCCCTTCTTCTCTTTCTTCTACCATTCATTCAAATTCTAACTTTTCATGCTTCTCCCATTTCCTCCTCCGACATTATCATCGTACAAGGAAACACGACACTGAGGAGCCAAAACCAAACCTTCGAACTGGGCTTCTTCAACTTCACCACAGTCTCACCCAACTTCTACCTCGCGATCCGTTACACATCACTACCAGCCCCAAACATCATTTGGGTCGCTAACCGCCATCAACCAACTCCAACCCTCGACGGTTCGGTTCTTCGGTTGACCCCAACCGGTCAATTACTGCTCACTCACTCTAACTCCACCGTCTGGGAAGCCAACCACACCCATGCCGTTCAATTCAACCTTCTAGAAACTGGTAACTTAGTTCTCCTATCCTCTGACGGCGTCGTTTTATGGCAGAGCTTCGATTACCCCACCGACACTTGGCTTCCCGGCATGAACCTGACCCGGTTCCGATCCCTTCTTTCATGGCGCACCGAAACGGACCCGTTTCCTGGGTTTTATTCTCTGCGGCTGAGACCACCGGATTACGGTGAGTTCGACCTCGTCTTCAACGGCACCGTTTCGTACTGGTCCACCGGGAATTGGACCAATGGGTCGTTCCTCAATGTTCCGGAGATGACTATTCCTTACCTTTACCGGTTCGATTTCGAGGACCCGTTTTCGCCGACGGCGTCTTTTGGGTTCTCCGAGAGGGCCTCGGAGAACGGAATCCGGCCGCCGACAATGTTCCGCGTGGAACCGTTCGGGCAGGTTCGGCAGTACACGTGGTCGAAGCAGGCGGGTTCGTGGAACATGTTTTGGTCGAAGCCTGAGAGTGTGTGTCAGGTTCGGGGGTTGTGCGGTGGGTTCGGTGTGTGCAGTGGGGAAATGTCGAGGGTTTGTGAATGTGTGAGTGGGTTTGAGCCTGTGGATGGTGTTGGGTGGGGTTCCGGTGACCACTCTCGGGGTTGTCGCCGTGTGGTGGACACGTGTGATGAGAGTGATGGTTTTGAGGATCTGGGTGTGGTCACGTTTGGTTATGGTAATGTGAGTATGTTTAGGGCTAAATCTAGAAGCTTATGTGAGCGTGAGTGTTTGAGTTCTTGTGGTTGTGTTGGTTTGGCTTTTGATGGAGGGAGTGGTGTGTGTAAGAATTTTTATGGGGTTCCAAGAGGTGGATCTGTGAAGAGGGGTTTTAGTCGTAAGGTTTTGAGTGCAGCTGTTATTGGTTCGGTTGCGGTTTTGGGTGTGGTGGTGGTGACATTGTTGGTGGTGGTGAAGAAGAGGAGGAAGAAGGGTTTGGAGGAAGATGGGTTTGTGCCTGTGTTGAATTTGCAGGTGTTTTCTTATAAGGAGCTTCAGTTGGCGACCCGTGGGTTTTCGGAGAAGGTTGGGCATGGTGGGTTTGGGACTGTGTTTCAAGGGGAGTTGAGTGATTCTACACTTGTGGCTGTAAAGAGGTTGGAGAGGCCTGGGGGTGGAGAGAAAGAGTTTAGGGCCGAGGTGTCTACAATTGGGAACATTCAACATGTTAATCTTGTGAGGCTCAGAGGGTTTTGCTCTGAGAATTCTCATAGGCTTTTGGTTTATGAGTATATGCAGAATGGTGCCCTCAGCACTTATTTGCGCAAAGAGGGGCCAAGTTTGAGCTGGGATGTTAGGTTTCGGGTGGCCATTGGAACTGCTAAAGGTATAGCGTATTTACATGAGGAATGTAGGTGTTGCATCATACACTGTGATATCAAGCCTGAAAACATCCTTTTGGATGGTGACTTCACTGCAAAAGTTTCTGATTTTGGGTTGGCGAAGCTCATTGGTAGGGACTTCAGTAGGGTGTTGGCAACCATGAGGGGTACGTGGGGATATGTTGCCCCAGAGTGGATTTCTGGTGTGGCGATTACCACCAAAGCTGATGTTTACAGCTATGGAATGACATTGCTGGAACTGATTGGTGGTCGCCGGAATGTGGAGGCGCCACCTTCTGCTGGGGCTAGGGAGAGTGGTTGCGAGACGGGAGAGAAGTGGTTCTTTCCTCCATGGGCGGCACAGCAGATAATTGAGGGTAATGTGACTAATGTGATTGATAAGAGGCTTGGAAATGTATATAACATTGAGGAGGCTAGGAGGGTTGCTTTGGTGGCAGTTTGGTGCATTCAAGATGATGAGGCAATGAGACCTACCATGGGTATGGTGGTGAAAATGTTAGAGGGGTTGGTGGAGGTGAATGTTCCTCCACCGCCGAAGTTGCTACAGGCGTTAGTTACTGGGGATTCCTTTCACGGGGTCAAGGCTGATTCCGGCACCGGGGTGTCCACTGGTGGCAGCTTATCTGATGGCAATTTGGAAGTGTCAACTGCTGATTCTGAATCATATATAGGGAATGTTTTGTCCCCAATGGATGTTAATGTTAGTGTTCGATGA | 2412 | 0.5017 | MSLLLFLLPFIQILTFHASPISSSDIIIVQGNTTLRSQNQTFELGFFNFTTVSPNFYLAIRYTSLPAPNIIWVANRHQPTPTLDGSVLRLTPTGQLLLTHSNSTVWEANHTHAVQFNLLETGNLVLLSSDGVVLWQSFDYPTDTWLPGMNLTRFRSLLSWRTETDPFPGFYSLRLRPPDYGEFDLVFNGTVSYWSTGNWTNGSFLNVPEMTIPYLYRFDFEDPFSPTASFGFSERASENGIRPPTMFRVEPFGQVRQYTWSKQAGSWNMFWSKPESVCQVRGLCGGFGVCSGEMSRVCECVSGFEPVDGVGWGSGDHSRGCRRVVDTCDESDGFEDLGVVTFGYGNVSMFRAKSRSLCERECLSSCGCVGLAFDGGSGVCKNFYGVPRGGSVKRGFSRKVLSAAVIGSVAVLGVVVVTLLVVVKKRRKKGLEEDGFVPVLNLQVFSYKELQLATRGFSEKVGHGGFGTVFQGELSDSTLVAVKRLERPGGGEKEFRAEVSTIGNIQHVNLVRLRGFCSENSHRLLVYEYMQNGALSTYLRKEGPSLSWDVRFRVAIGTAKGIAYLHEECRCCIIHCDIKPENILLDGDFTAKVSDFGLAKLIGRDFSRVLATMRGTWGYVAPEWISGVAITTKADVYSYGMTLLELIGGRRNVEAPPSAGARESGCETGEKWFFPPWAAQQIIEGNVTNVIDKRLGNVYNIEEARRVALVAVWCIQDDEAMRPTMGMVVKMLEGLVEVNVPPPPKLLQALVTGDSFHGVKADSGTGVSTGGSLSDGNLEVSTADSESYIGNVLSPMDVNVSVR* | 804 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr10g1317 | 803 | CDD | STKc_IRAK | 461 | 735 | - | - | |
Apr10g1317 | 803 | ProSitePatterns | Protein kinases ATP-binding region signature. | 461 | 483 | IPR017441 | GO:0005524 | |
Apr10g1317 | 803 | Pfam | S-locus glycoprotein domain | 194 | 306 | IPR000858 | GO:0048544 | |
Apr10g1317 | 803 | Gene3D | - | 26 | 138 | IPR036426 | - | |
Apr10g1317 | 803 | SMART | blect_4 | 28 | 141 | IPR001480 | - | |
Apr10g1317 | 803 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-2 | 4 | 791 | - | - | |
Apr10g1317 | 803 | Gene3D | Transferase(Phosphotransferase) domain 1 | 530 | 740 | - | - | |
Apr10g1317 | 803 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 55 | 199 | IPR036426 | - | |
Apr10g1317 | 803 | SUPERFAMILY | Protein kinase-like (PK-like) | 438 | 733 | IPR011009 | - | |
Apr10g1317 | 803 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 573 | 585 | IPR008271 | GO:0004672|GO:0006468 | |
Apr10g1317 | 803 | CDD | B_lectin | 31 | 141 | IPR001480 | - | |
Apr10g1317 | 803 | Pfam | Protein kinase domain | 458 | 729 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr10g1317 | 803 | Gene3D | Phosphorylase Kinase; domain 1 | 428 | 529 | - | - | |
Apr10g1317 | 803 | ProSiteProfiles | Bulb-type lectin domain profile. | 25 | 139 | IPR001480 | - | |
Apr10g1317 | 803 | ProSiteProfiles | Protein kinase domain profile. | 455 | 736 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr10g1317 | 803 | SMART | serkin_6 | 455 | 736 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr10g1317 | 803 | PIRSF | SRK | 1 | 786 | IPR024171 | GO:0004674 | |
Apr10g1317 | 803 | PANTHER | S-LOCUS LECTIN KINASE FAMILY PROTEIN | 4 | 791 | - | - | |
Apr10g1317 | 803 | Pfam | D-mannose binding lectin | 70 | 153 | IPR001480 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr10g1317 | Apr-Chr10 | 25492659 | 25495427 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr10g1317 | 445 | 742 | Receptor kinase-like Gene Family | AT5G20050 | 46.945 | 1.38e-82 | 270 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_SD-2b | Apr10g1317 | Pkinase | 2.2e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr10g1317 | - | - | lja:Lj0g3v0252549.1 | 1248.03 |