Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1303 ATGATAGAAGGTGGTAGAATCCGGCTGAAGACATGGCAGCAGGCGGCTGTGGCGGTGGGTTCGGCGGTGGGGGCATTGTTGGACCCACGAAGAGCGGATTTGATAGCGGCTCTTGGGGAGACAACTGGAAAGCCTGCTTTTGAGAGAGTTCTTCAGAAGATGAAGAGTTCCCCTGAAGGGAGGGCAGTACTCTTGGAGCGCCCTCGCGTTTTATCTGCAAATGTAGGACATGCTTGGGACCTTCCAGCAAACACATTTGGTGCCGCCTATGCAAGATTTATGGGATCCAGGAATTTTTCACCAGATGATCGACCTCCTGTGCGAGGGGTACCCACTCATGGTGGACGCTACATTCAATACAATATCTATGGTAATCTCTTTGAGGTTTCAAGAAAGTATGTCCCTCCTATTCGCCCTGTGGGTAGAGGCGCTTATGGTATTGTTTGTGCTGCTGTAAATGCAGAGACAGGTGAGGAAGTTGCCATTAAGAAGGTTGGCAATGCATTTGACAACAGAATAGATGCCAAAAGGACCTTACGAGAAATTAAGCTTCTTCGGCACATGGATCATGAAAATATTATGTCTATTAAAGATATTATTCGACCTCCACAGAAGGAAAACTTCAATGATGTGTACATGGTTTCTGAATTAATGGACACAGATCTGCATCAAATAATACGATCCAATCAACCATTGACTGATGATCATTGTCGGTATTTTATGTATCAGTTGTTACGAGGGCTCAAATATGTGCATTCAGCAAATGTTTTGCACCGTGACCTAAAGCCTAGCAATTTGTTATTGAATGCCAATTGTGACCTTAAGATTGCAGACTTTGGTCTTGCTAGAACTACATCTGAAACTGATTTTATGACTGAGTATGTGGTTACTCGATGGTATCGAGCTCCCGAGTTGCTTCTTAATTGTTCAGAATATACAGCAGCCATTGACATATGGTCTGTTGGATGCATACTTGGTGAAATCATAACAAGACAACCCCTCTTTCCTGGCAAAGATTATGTTCATCAGTTGAGACTGGTCACAGAGCTGATAGGTTCACCCGATGATGCCAGCCTCGGATTTCTACGAAGTGATAATGCTCGAAGATATGTAAAACAGCTTCCACAAAATCCAAAGCAAAACTTTTCTGCTAGATTCCCCAACATGTCTCCTGGTGCTATTGATTTGCTAGAGAAGATGCTTATCTTTGATCCAAACAGGCGTATTACAGTTGATGAGGCATTGTGCCACGCATACATGGCACCTCTTCATGATATCAATGAGGAGCCTGTTTGCACCAGACCTTTCAGTTTTGACTTTGAGCAACCATCGTTCACTGAAGAAGATATCAAGGAGCTCATCTGGAGAGAATCTGTGAAGTTCAATCCTGATCCACCAGTTTACTGA 1407 0.4378 MIEGGRIRLKTWQQAAVAVGSAVGALLDPRRADLIAALGETTGKPAFERVLQKMKSSPEGRAVLLERPRVLSANVGHAWDLPANTFGAAYARFMGSRNFSPDDRPPVRGVPTHGGRYIQYNIYGNLFEVSRKYVPPIRPVGRGAYGIVCAAVNAETGEEVAIKKVGNAFDNRIDAKRTLREIKLLRHMDHENIMSIKDIIRPPQKENFNDVYMVSELMDTDLHQIIRSNQPLTDDHCRYFMYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIADFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIITRQPLFPGKDYVHQLRLVTELIGSPDDASLGFLRSDNARRYVKQLPQNPKQNFSARFPNMSPGAIDLLEKMLIFDPNRRITVDEALCHAYMAPLHDINEEPVCTRPFSFDFEQPSFTEEDIKELIWRESVKFNPDPPVY* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1303 468 ProSitePatterns MAP kinase signature. 169 272 IPR003527 GO:0004707|GO:0005524|GO:0006468
Apr10g1303 468 CDD STKc_TEY_MAPK 127 463 - -
Apr10g1303 468 Pfam Coenzyme Q (ubiquinone) biosynthesis protein Coq4 6 118 IPR007715 GO:0006744
Apr10g1303 468 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 110 467 - -
Apr10g1303 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Apr10g1303 468 SUPERFAMILY Protein kinase-like (PK-like) 137 427 IPR011009 -
Apr10g1303 468 SMART serkin_6 134 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1303 468 Gene3D Transferase(Phosphotransferase) domain 1 218 447 - -
Apr10g1303 468 ProSitePatterns Protein kinases ATP-binding region signature. 140 164 IPR017441 GO:0005524
Apr10g1303 468 ProSiteProfiles Protein kinase domain profile. 134 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1303 468 Gene3D Phosphorylase Kinase; domain 1 117 457 - -
Apr10g1303 468 Pfam Protein kinase domain 138 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1303 468 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 110 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1303 Apr-Chr10 25346541 25348936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1303 100 467 MAP Kinase Gene Family AT4G01370 84.783 0.0 683
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Apr10g1303 Pkinase 2e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1303 K20600 - gmx:100779469 720.309