Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1286 ATGGAAAACCAAGACCCACCAAACCCTTCACCACCCTCATTGTTACTACCACCACAAAACTATCCTCCTTTTCTCTCCACTCCCATGTCAATGATGCAAAACCCTTTGGACCCTCAAGGCTTGCATGACATAGACTTGGTTAACCTTTTCTCTTGCCAAAACAGCTTGTTTGGGGATACCAAGGCAATGGTGGAATGCGCTTCTTCTTCTTATTCCTCGTCTTCTTCATGTGCTTTAATGGATGAAAATGGAGCTTACATGAATGAAAGGAGTAATAAGGAGAAAAGGAAAGGAGGTAGATTGAAGAAGACAACAAGACCCAAGTTTGCGTTTCAGACAAGCAGTGCAGATGATATTCTTGATGATGGTTATCGTTGGAGGAAGTATGGGCAGAAAGCTGTGAAGAACAGCATATATCCCAGAAGCTACTACCGCTGCACACATCATACATGCAATGTGAAGAAACAGGTGCAAAGGTTATCCAAAGACACAAGCATCGTGGTGACCACTTACGAGGGAATTCACAATCACCCATGCGAGAAGCTGATGGAAACCCTAACGCCTCTTCTAAAGCAAATGCAGTTTCTCTCAGCGTTCGGTTCCAATACCAGTGACCCTGCTTCTCTGATATAG 633 0.4408 MENQDPPNPSPPSLLLPPQNYPPFLSTPMSMMQNPLDPQGLHDIDLVNLFSCQNSLFGDTKAMVECASSSYSSSSSCALMDENGAYMNERSNKEKRKGGRLKKTTRPKFAFQTSSADDILDDGYRWRKYGQKAVKNSIYPRSYYRCTHHTCNVKKQVQRLSKDTSIVVTTYEGIHNHPCEKLMETLTPLLKQMQFLSAFGSNTSDPASLI* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1286 210 MobiDBLite consensus disorder prediction 1 24 - -
Apr10g1286 210 PANTHER WRKY TRANSCRIPTION FACTOR 43-RELATED 40 195 - -
Apr10g1286 210 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 40 195 IPR044810 GO:0003700
Apr10g1286 210 Pfam WRKY DNA -binding domain 121 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr10g1286 210 Gene3D WRKY domain 105 179 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr10g1286 210 MobiDBLite consensus disorder prediction 1 33 - -
Apr10g1286 210 SMART WRKY_cls 120 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr10g1286 210 ProSiteProfiles WRKY domain profile. 115 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr10g1286 210 SUPERFAMILY WRKY DNA-binding domain 114 179 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1286 Apr-Chr10 25166763 25167964 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1286 97 201 WRKY Transcription Factor Family AT5G41570 72.222 8.25e-55 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr10g1286 WRKY 5.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1286 - - gmx:100810669 278.1