Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1282 ATGTCTTCCTCAAACCCTTATTCTCCACCATCACCAACCACCCCTTACTTCACCAACCTTGGCTTCGGCTACTCCATCGCCATTGCACTCGGTTTTCTCTTTCTTCTCTCCACTCTCATTCTCTCTTCCTATCTCTGTTGCCGCACTCTCCGCAACCGTAACAACCGCACCACCACCCAACCCAACCCTGATGGCATCGTTCTGCCACGTGTCATATTTGTAGCTGAAGATGATGACGACGATCAGAACCCGCACCGTGATGGAAACGACGTCGTTTTGGGGTTGGACCAGGGGGTTATTAATTCTTACCCTAAGTTTCCTTTTGTGAAAGATGGTGAACGCATGAAATCTTTTGATATTCTTAGTCCTGAAGATAAGGGAATGACAAAACACAATGTTAATACAAAGTTTAAAAGATGGAGACGTGTTTACTGTTTCATGTTTATACCTGCTGCTCTTGCTCTTATCCTCTCTGCTGCTGCCATGTCCAAGTTCTCCTACAAATCATTTCTTGGTACTGAATCATTATACTCAAATCTGAATCCTGAGGTCCCAAATGGGAATCAAAATGAAATGATGACAACTGTACAAAATGTAATTCAGAAGATTCAAGAGGAACTGGACAAACTGAGGGAAACAGATGAAGACTCATCATCATCACCACTTATATTCCAACATGGTGCATTTCTTGCTGATATAGTAGGACTTCTTGAGTCAGTGGTAGCACCTCATCAGCAAAATGGTAGTTTCACAGTTCATCCTCTGGTGAGTAAAAAGAAGCAATCTGATGAACCTGCTGATTACTTCCTGCGAGAAGAGATTCGCAAGTATCTCAGGATCAAGCCCAACAGATTAGGAAAACAAAATTTTATGGGGGCAAATGCAACCTTCACCAGCATAGGACATGCGTGCTTTGCCATGAAGGAAGAGCTAGAAGAATACATGGATTATGATGTTGGTGAAATCTGCAATGATGACTGGAAACTAGCTCAAAAGCTTATGGTACATGGCTGTGATCCTCTACCAAGGAGAAGGTGCTTTTCAAGAGCTCCTAAGCTATACAATCAACCATTTCCCCTCAATGAATCCCTATGGAAGCTCCCTGATGATAGAAATGTTAGATGGAGTCAATACCGGTGCAAAAACTTTGCTTGTCTCGCCAACAACACCACTCACAAAGGATTCTTCAAGTGTGCAGACTGCTTCAATCTCACCAACCATGAGAAGCCAAGATGGGTAAGATTGGATGCTGATCAAAACCAGACAGCTGATTTCCTCATATCTGAGGTTCTTGGAATTAAGCCAGGAGAGATCAGAATAGGATTAGATTTCAGTGTTGGAACTGGGACTTTTGCTGCTAGGATGAGGGAATTCAATGTGACAATAGTTTCAGCCACTATCAATTTTGGGGCACCCTTCAGTGAAATGATAGCTCTTAGAGGACTTGTTCCTCTCTACTTGACTATAAATCAAAGGCTTCCATTTTTTGACAACACCCTTGATTTGATTCACACAACAAGATTTCTAGATGGGTGGATTGACTTTGTGCTCCTAGACTTTGTATTGTATGACTGGGATAGAGTTTTGAGGCCAGGCGGGTTGCTTTGGATTGATAGCTTTTTTTGCTTGAAGGAAGATATATATGATTACTTGCAGGCCTTCAATACTCTTAGATATAAGAAGCACAAATGGGTTGTTGTTCCAAAGCTTGATAAGGATGATCAAGAAATCTTCTTTTCTGCTGTTTTAGAGAAGCCTCCTAGGCCATTCAGGTGA 1776 0.4212 MSSSNPYSPPSPTTPYFTNLGFGYSIAIALGFLFLLSTLILSSYLCCRTLRNRNNRTTTQPNPDGIVLPRVIFVAEDDDDDQNPHRDGNDVVLGLDQGVINSYPKFPFVKDGERMKSFDILSPEDKGMTKHNVNTKFKRWRRVYCFMFIPAALALILSAAAMSKFSYKSFLGTESLYSNLNPEVPNGNQNEMMTTVQNVIQKIQEELDKLRETDEDSSSSPLIFQHGAFLADIVGLLESVVAPHQQNGSFTVHPLVSKKKQSDEPADYFLREEIRKYLRIKPNRLGKQNFMGANATFTSIGHACFAMKEELEEYMDYDVGEICNDDWKLAQKLMVHGCDPLPRRRCFSRAPKLYNQPFPLNESLWKLPDDRNVRWSQYRCKNFACLANNTTHKGFFKCADCFNLTNHEKPRWVRLDADQNQTADFLISEVLGIKPGEIRIGLDFSVGTGTFAARMREFNVTIVSATINFGAPFSEMIALRGLVPLYLTINQRLPFFDNTLDLIHTTRFLDGWIDFVLLDFVLYDWDRVLRPGGLLWIDSFFCLKEDIYDYLQAFNTLRYKKHKWVVVPKLDKDDQEIFFSAVLEKPPRPFR* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1282 591 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 405 566 IPR029063 -
Apr10g1282 591 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 132 590 - -
Apr10g1282 591 Coils Coil 193 216 - -
Apr10g1282 591 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 431 541 IPR004159 GO:0008168
Apr10g1282 591 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED 132 590 - -
Apr10g1282 591 Gene3D Vaccinia Virus protein VP39 411 578 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1282 Apr-Chr10 25145838 25149623 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1282 11 105 C3H Transcription Factor Family AT5G07040 34.737 6.62e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1282 - - var:108346439 925.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1282 10 25145838 25149623 Apr10g1282 10 25145838 25149623 ECH