Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1281 ATGGCGGAGGAATCGGAGAAAACAGTGCCGCCGCCGAGTGGCGAATCGTTGCTTGATAAGATCAGCGAGAAGCTGCACGGCCACGATTCCTCCTCCTCCTCCTCCTCCTCCGATTCAGATTCCGATAAGAAGGACACTTCGTCCATTAAGGACAAGGTTTATCGGCTCTTCGGGAGGGAGAAGCCCGTTCATTCCGTTCTCGGCGGCGGAAAGCCTGCTGATGTGCTCTTGTGGAGGAACAAGAAGATATCTGCTGGTGTACTCGGCGGAGCCACTGCTGTTTGGATCTTTTTTGAGTTGCTTGAATATCACCTGCTTACTCTAGTCTGTCACATTTTGATTTTGTTGCTTGCGGGTTTGTTTTTGTGGTCCAATGCTCATACCTTTATTCATAAGGCTCCACCTCGCATACCAGTTGTTCATCTTCCTGAAGAACCATTTGTCCAAGTTGCATCTGCGTTGAGAATTGAAATCAATCGTGGATTTGCTGCCCTGCGTACTATTGGCTCTGGAAGAGATTTGAAGAACTTCCTCCTTGTTATTGTTTGCTTGTGGATTCTGTCAATTGTGGGTAGCTGCTGCAATTTCTTGACCTTATTCTACATTGCTTTTGTTTTGTTGCACACTGTACCTGTCTTGTATGATAAATATGAGGATAAGATAGACCCTCTGGCGGAAAAGGCAGCCGTTGAGATTAAAAAGCAGTATGCAGTGTTTGATGCAAAGGTCTTGAGTAAGATTCCGAAAGGGCCGTTGCAAGGCAAGAAGTTAGCTTAG 777 0.4646 MAEESEKTVPPPSGESLLDKISEKLHGHDSSSSSSSSDSDSDKKDTSSIKDKVYRLFGREKPVHSVLGGGKPADVLLWRNKKISAGVLGGATAVWIFFELLEYHLLTLVCHILILLLAGLFLWSNAHTFIHKAPPRIPVVHLPEEPFVQVASALRIEINRGFAALRTIGSGRDLKNFLLVIVCLWILSIVGSCCNFLTLFYIAFVLLHTVPVLYDKYEDKIDPLAEKAAVEIKKQYAVFDAKVLSKIPKGPLQGKKLA* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1281 258 Pfam Reticulon 73 228 IPR003388 -
Apr10g1281 258 MobiDBLite consensus disorder prediction 1 46 - -
Apr10g1281 258 ProSiteProfiles Reticulon domain profile. 72 258 IPR003388 -
Apr10g1281 258 PANTHER RETICULON 1 256 IPR045064 GO:0009617
Apr10g1281 258 PANTHER RETICULON-LIKE PROTEIN 1 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1281 Apr-Chr10 25141483 25143729 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1281 - - gmx:100779788 399.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1281 10 25141483 25143729 Apr10g1281 10 25141483 25143729 ECH
Apr4g2317 4 32210661 32219779 Apr10g1281 10 25141483 25143729 PCT