Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1264 ATGGGAAACAGTGAGGAAGGGAAACCCGTTAAGAATGGAAATCCTTCTTCACCCGTAACAACTGATCAAACCAATCAGGCCAACCAGCCTAACATTCATGTCTACCCTGATTGGGCTGCCATGCAGTATTATGGGCCGAGAGTCAACATTCCACCATACTTCAACTCAGCCGTGGCTTCTTCTGGTCATGCTCCACACCCATACATGTGGGGACCCCCACAGCCTATGATGCCACCTTATGGGCCTCCTTATGCAGCATTTTATTCACATGGAGGGGTTTATACTCACCCTGCAGTTGCTATTGGGCCACATTCACATGGTCAAGGAGTTCCTTCTTCTCCTGCTGCTGGGACCCCTTCGAGTGTGGAAACACCAACCAAATTATCTGGAAATACTGATCAGGGTTTAATGAAGAAATTGAAAGGGTTTGATGGGCTTGCAATGTCAATAGGCAATTGCAATGCTGAGAGTGCTGAGCGTGGGGCTGAAAACAGGCTGTCACAGAGTGTGGATGCTGAGGGTTCAAGTGATGGAAGTGATGGTAACACTGCAGGGGCTAATCAAACAAGAAGGAAAAGAAGCCGAACGGGAACACCAACTACTGATGGAGAAGGGAAGACTGAGATACAAGATGGTCCAGTTTCCAAAGAGACTTCAGCTTCTAAAAAGATTATGCCAGTTACCCCAACGAGTGTTGCAGAAAAATTAGTTGGACCTGCAGTTTCTTCAGGTATGACCTCAGCACTGGAGCTTAGGAACCCTTCCGCTGTTCATTCTAAGGCAAATTCTGCAAGTGCTCCACAACCTTGTGGAGTTTTGCCTTCTGAAGCTTGGTTACAGAATGAGCGTGAGCTGAAACGGGAGAGGAGGAAACAGTCCAACCGTGAATCTGCTAGAAGATCTAGGCTGAGGAAGCAGGCTGAGACCGAAGAATTGGCAAGAAAAGTTGAACTGTTATCGACTGAGAATGTGTCACTGAAATCAGAAATAAATCAATTGACTGAAAGTTCTGAGCAGCTGAGGATGGAAAATTCTGCATTGAGGGAAAAACTGGGAAAATCTGATCCGGGACGAACAGAAGAAATAATTTTGAGCAGCATTGACAGCAAGAGGGCTACACCTGTGAGTACAGAAAACTTACTATCAAGAGTTAATAATTCCAGTTCTAATGATAGAACTGCAGAGAGTGAGACTGATTTCTGTGAGAATAAAACGAACTCTGGTGCAAAGCTGCATCAACTACTGGATACAAATCCTCGAGCTGATGCTGTGGCAGCTGGTTGA 1284 0.4579 MGNSEEGKPVKNGNPSSPVTTDQTNQANQPNIHVYPDWAAMQYYGPRVNIPPYFNSAVASSGHAPHPYMWGPPQPMMPPYGPPYAAFYSHGGVYTHPAVAIGPHSHGQGVPSSPAAGTPSSVETPTKLSGNTDQGLMKKLKGFDGLAMSIGNCNAESAERGAENRLSQSVDAEGSSDGSDGNTAGANQTRRKRSRTGTPTTDGEGKTEIQDGPVSKETSASKKIMPVTPTSVAEKLVGPAVSSGMTSALELRNPSAVHSKANSASAPQPCGVLPSEAWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVELLSTENVSLKSEINQLTESSEQLRMENSALREKLGKSDPGRTEEIILSSIDSKRATPVSTENLLSRVNNSSSNDRTAESETDFCENKTNSGAKLHQLLDTNPRADAVAAG* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1264 427 PANTHER G-BOX-BINDING FACTOR 3 1 427 - -
Apr10g1264 427 MobiDBLite consensus disorder prediction 9 31 - -
Apr10g1264 427 MobiDBLite consensus disorder prediction 280 312 - -
Apr10g1264 427 MobiDBLite consensus disorder prediction 158 238 - -
Apr10g1264 427 MobiDBLite consensus disorder prediction 1 31 - -
Apr10g1264 427 MobiDBLite consensus disorder prediction 253 312 - -
Apr10g1264 427 MobiDBLite consensus disorder prediction 104 136 - -
Apr10g1264 427 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 427 IPR044827 GO:0003700|GO:0006355|GO:0043565
Apr10g1264 427 Gene3D - 285 338 - -
Apr10g1264 427 MobiDBLite consensus disorder prediction 253 269 - -
Apr10g1264 427 Pfam bZIP transcription factor 282 344 IPR004827 GO:0003700|GO:0006355
Apr10g1264 427 SUPERFAMILY Leucine zipper domain 285 341 IPR046347 GO:0003700|GO:0006355
Apr10g1264 427 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 289 304 IPR004827 GO:0003700|GO:0006355
Apr10g1264 427 SMART brlzneu 282 346 IPR004827 GO:0003700|GO:0006355
Apr10g1264 427 MobiDBLite consensus disorder prediction 326 359 - -
Apr10g1264 427 MobiDBLite consensus disorder prediction 161 205 - -
Apr10g1264 427 Pfam Disordered region downstream of MFMR 133 261 - -
Apr10g1264 427 Coils Coil 316 350 - -
Apr10g1264 427 MobiDBLite consensus disorder prediction 383 405 - -
Apr10g1264 427 Pfam G-box binding protein MFMR 1 99 IPR012900 -
Apr10g1264 427 MobiDBLite consensus disorder prediction 212 226 - -
Apr10g1264 427 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 284 347 IPR004827 GO:0003700|GO:0006355
Apr10g1264 427 CDD bZIP_plant_GBF1 287 335 IPR045314 GO:0003700|GO:0006355
Apr10g1264 427 MobiDBLite consensus disorder prediction 111 133 - -
Apr10g1264 427 MobiDBLite consensus disorder prediction 326 341 - -
Apr10g1264 427 MobiDBLite consensus disorder prediction 342 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1264 Apr-Chr10 24978409 24983639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1264 1 427 bZIP Transcription Factor Family AT2G46270 50.346 2.39e-114 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Apr10g1264 MFMR_assoc 1.5e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1264 K09060 - gmx:547789 676.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1264 10 24978409 24983639 Apr10g1264 10 24978409 24983639 ECH