Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1246 ATGTGCAACCTCTTCTTCACCATCACACTGTTCGTCCTCTTTGCCACAGCCAAAGGATCAACCACCAACAACAGAAGAATCCTCCACCAACCCTTTATCCAACAGGGTACTCTCCCTCCCTCACAGCCACCAAATCCACCACCACCTTCCCCTTCTCCATCACCACCAAACCCGAAGTACCCATTTTCATCAACAACACCCCCTAATGATTCTTCAAAACCCTTCTTCCCCACATACCCATCACCACCACCGCCTCCTTCTCCTTCAGCCTTTGCTTCTTTCCCCGCCAATATCTCCTCTCTTATCCTCCCTCAAACCCCCAAATCCAAATCCAGCTCCGGCAAGCTTCTCGCCGTCGCCATTGCCGCCGTTTCCTGCGCCCTCCTAGTCGTCGCCGTCTCCGCCTTCGTTTACTGCCGCCGGAGACGCAAAAGCTACTCTGCTGACGAGAAGACCCTCAGATCCGACAGTAGTATCCGCCTCTTCCCTCGTGAAGCCACCGCCGGCGCCGGTGGACGAAAAACCAGGAATACATCTTCCACGAGCTCTGAGTTTCTCTACCTTGGCACCATTGTTAACTCCCGCAGTGGCGTCGACGATCTCTCCGACCCACGCGCCGGAGCCGCCATGAATCCTCGGAAAATGGACTCGCCGGAGCTTCAGCCGCTTCCGCCGCTGGCACGACAAGCTTCGAGGCTCCGTGATGAGGTGACGGCGATGGCGGAGGAGGAGGAGGAAGAGTTTTACTCGCCGAGAGGGTCTTTGAACGGCCGGGAAGGCTCCATCGGAACTGGATCGTGTTCCCGGCGAGTGTTCTCCACCATTGCCGGAGAGAACTTCGTGGGTCGTAGCAGTAGTGAATCAACCTCTTCTTCGTACTCATCTTCCTCTTCTGCTTCGCCGGATTGCTCTCATTCCATTTCTCTTTCGCCGCCGGTGAGCATAAGCCCCAGAAGATCACAACCCAAGTCGCCGGAAAATGCAGTAACCCACCATTCTCCTCCGCCGCCTCCACCGGCGCAACCCCTCGACAGTAGAAGCACACTCTCCTCATCTACATTCTCATCACCGCGACTTGCGTCACCGGTTTTCAACCAGCACGTTCAGTCTTCTTCAATGTCTTCGACGCCGGAGAGAAGGGAGTGTCAGTCACCGTCGCTGTCACCGCTCGCGCTGTCACCAAAGAAAAACCCAGATGGGTCACTGACACTTTCAAGCGTTGCACTTGAAAAGTCACAATCTTTTCGATCATCTGTGAAAGAAAATGATGATGGGTCGCCGAGACTTTCGAACGCTTCTTCGTGTGGCAAGTCTGTGACTTCGTCTTCGGCGTTTTCTCTGCCGTCGCCGGAGAAAGCGATGAACTTGCATCATGGGTTGGATCAGTCTCCGACTATTTCAGATGTTTCAGATCGGGATAGGCATTCTCCTCTTTCATCGCCGGAGAGAGAATTAAATACCCAACCAACACCTGCTCGGAAGCATTGGGAGATTCCGGATTTGTTAACACCCATTGGTGAATCATCCCCAACTGTTTCAGCTCCACCGATGTTGTCACAGAGAAAACAGTGGGAAATTCCGGTTCTTCCAACACCCATTGCACCATCTCCTAGTGTTTTAGCCCCTCCACCGCCGCCACCACCACCTCCGCCAGTGCCACGGCAGCGGAAACAGTGGGAAGTGCCGTCGCCCGCGACACCAGTGGATCAACCCGTTTCGAGGCTGCCAGTGTTGACACCTCCTTCAAGGCCTTTTGTGTTGCAAACCCCAGATGCCAAGGTTTCTCCTGTTGAGTTGCCACCTGCAAGTTCTTTGCGGGTGGTTGAGGAGAACTCTGAGGAGAGTTCTAAACCAAAGTTGAAGCCTTTGCACTGGGACAAAGTGAGGGCTAGCTCTGATCGTGAAATGGTGTGGGATCAGTTGAGGTCAAGCTCTTTTAAGTTGAATGAGGAGATGATCGAGACCTTGTTTGTAGTGAACACACCAAACCCAAAGCCCAAGGATACTACTCCACGATCAGTTCTCGCCCCGCAAAATCAGGAGGATAGGGTATTGGATCCTAAAAAGTCACAAAACATTGCTATCTTGCTAAGAGCGCTTAATGTGACTATAGAAGAAGTGTGTGAAGCACTGTTAGAAGGTGTTACTGATACCCTTGGAACTGAACTACTTGAAAGCTTGTTAAAAATGGCACCTAGCAAGGAAGAAGAACGTAAATTGAAGGAACATAAAGATGATTCTCCAGCCAAGCTTGGTCCTGCCGAGAAATTTTTGAAGGCAGTGCTTGATGTTCCTTTCGCATTTAAAAGGGTGGAAGCAATGCTTTACATAGCCAATTTTGAGTCGGAAGTGGAGTATCTTAGAAAATCCTTTCAAACTTTGGAGGCTGCCTGTGAAGAGCTGCGAAACAGTAGAATGTTCTTGAAGCTCCTAGAGGCTGTGCTTAAAACTGGGAACCGCATGAATGTGGGGACAAACCGTGGTGACGCACATGCATTCAAGCTTGATACACTTCTCAAGCTGGTTGATGTCAAAGGTGCAGACGGGAAAACCACTCTACTACACTTCGTCGTCCAGGAAATTATCAGAACTGAAGGCGCACGTCTCTCAGGCACCAACCAAACTCCAAGCACAAATCTCAACGAAGATGCCAAGTGTAGACGGCTCGGCCTGCAAGTTGTATCTAGCTTGAGTTCAGAGCTAGCAAATGTGAAGAAGGCCGCAGCTATGGATTCTGAAGTCCTCAGCAGTGAGGTGTCAAAACTTTCCAAAGGACTCACCCACATAGGAGAGGTTGTGAAGTTAAATGAAACATCAGGATCAGATGAAAGCAGTGAGAAATTCAAAGAGTCAATGAACAAGTTCATGAGAATGGCTGAAGAGGAGATTCTAAAAGTTCAAGCCCAAGAAAGTGTTGCCTTATCCCTTGTGAAGGAGATCACAGAATATTTTCATGGGAACTTGTCAAAGGAAGAAGCTCATCCATTTAGAATCTTTATGGTAGTAAGAGACTTCTTAACAGTTCTTGATAGAGTGTGCAAAGAAGTTGGTATGATAAATGAGAGAACAATGGTTAGTTCTGCACATAGATTCCCTGTACCAGTGAATCCAATGCTTCCACAACCTCTTCCTGGACTACATGGAAGGAGACAATACAATTCCTCAGACGATGACACTTCATCACCTTAG 3189 0.498 MCNLFFTITLFVLFATAKGSTTNNRRILHQPFIQQGTLPPSQPPNPPPPSPSPSPPNPKYPFSSTTPPNDSSKPFFPTYPSPPPPPSPSAFASFPANISSLILPQTPKSKSSSGKLLAVAIAAVSCALLVVAVSAFVYCRRRRKSYSADEKTLRSDSSIRLFPREATAGAGGRKTRNTSSTSSEFLYLGTIVNSRSGVDDLSDPRAGAAMNPRKMDSPELQPLPPLARQASRLRDEVTAMAEEEEEEFYSPRGSLNGREGSIGTGSCSRRVFSTIAGENFVGRSSSESTSSSYSSSSSASPDCSHSISLSPPVSISPRRSQPKSPENAVTHHSPPPPPPAQPLDSRSTLSSSTFSSPRLASPVFNQHVQSSSMSSTPERRECQSPSLSPLALSPKKNPDGSLTLSSVALEKSQSFRSSVKENDDGSPRLSNASSCGKSVTSSSAFSLPSPEKAMNLHHGLDQSPTISDVSDRDRHSPLSSPERELNTQPTPARKHWEIPDLLTPIGESSPTVSAPPMLSQRKQWEIPVLPTPIAPSPSVLAPPPPPPPPPPVPRQRKQWEVPSPATPVDQPVSRLPVLTPPSRPFVLQTPDAKVSPVELPPASSLRVVEENSEESSKPKLKPLHWDKVRASSDREMVWDQLRSSSFKLNEEMIETLFVVNTPNPKPKDTTPRSVLAPQNQEDRVLDPKKSQNIAILLRALNVTIEEVCEALLEGVTDTLGTELLESLLKMAPSKEEERKLKEHKDDSPAKLGPAEKFLKAVLDVPFAFKRVEAMLYIANFESEVEYLRKSFQTLEAACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRTEGARLSGTNQTPSTNLNEDAKCRRLGLQVVSSLSSELANVKKAAAMDSEVLSSEVSKLSKGLTHIGEVVKLNETSGSDESSEKFKESMNKFMRMAEEEILKVQAQESVALSLVKEITEYFHGNLSKEEAHPFRIFMVVRDFLTVLDRVCKEVGMINERTMVSSAHRFPVPVNPMLPQPLPGLHGRRQYNSSDDDTSSP* 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1246 1062 MobiDBLite consensus disorder prediction 535 576 - -
Apr10g1246 1062 ProSiteProfiles Formin homology-2 (FH2) domain profile. 610 1035 IPR015425 -
Apr10g1246 1062 MobiDBLite consensus disorder prediction 239 266 - -
Apr10g1246 1062 PANTHER FORMIN-RELATED 5 1062 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Apr10g1246 1062 Pfam Formin Homology 2 Domain 612 1009 IPR015425 -
Apr10g1246 1062 MobiDBLite consensus disorder prediction 535 557 - -
Apr10g1246 1062 Coils Coil 227 247 - -
Apr10g1246 1062 MobiDBLite consensus disorder prediction 1037 1062 - -
Apr10g1246 1062 MobiDBLite consensus disorder prediction 199 223 - -
Apr10g1246 1062 MobiDBLite consensus disorder prediction 424 449 - -
Apr10g1246 1062 MobiDBLite consensus disorder prediction 73 90 - -
Apr10g1246 1062 MobiDBLite consensus disorder prediction 344 391 - -
Apr10g1246 1062 MobiDBLite consensus disorder prediction 281 517 - -
Apr10g1246 1062 MobiDBLite consensus disorder prediction 281 328 - -
Apr10g1246 1062 SMART it6_source 610 1024 IPR015425 -
Apr10g1246 1062 PANTHER FORMIN-LIKE PROTEIN 1 5 1062 - -
Apr10g1246 1062 MobiDBLite consensus disorder prediction 398 415 - -
Apr10g1246 1062 MobiDBLite consensus disorder prediction 37 63 - -
Apr10g1246 1062 MobiDBLite consensus disorder prediction 34 90 - -
Apr10g1246 1062 MobiDBLite consensus disorder prediction 329 343 - -
Apr10g1246 1062 SUPERFAMILY Formin homology 2 domain (FH2 domain) 542 1021 - -
Apr10g1246 1062 Gene3D Formin, FH2 domain 603 1018 IPR042201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1246 Apr-Chr10 24865040 24870087 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1246 559 1051 FH2 protein (formin) Gene Family AT3G25500 75.453 0.0 743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1246 - - gmx:100802678 1467.21