Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1245 ATGGAACAATTTAGACAGATTGGAGAGGCACTTGGGAGTTTGAAAGCTATGATGGTATTCCGGGAGAGCATTCAAATCAATCAGAGGCAATGTTGTTTGCTGCTGCATGTGTTCACCTTTGCATATGAGTCTATTGCAGATGAGATTACACAGAACCTGAAATTTGAAGAGAAGAATGCAAAGTGGAAGGCTCTTGAACAGCCCTTGAGAGAGATCCATAGGATTTTCAGAGAAGGAGAAGCTTACATTAGGCATTGCTTGGAAACAAAGGACTGGTGGGCTAAAGCCATTACCTTGTTTCACAACAAAGATTGTGTTGAGTTTCATATACACAACTTGCTTTGTTGCATGCCAATTTTAATCGAAGCTATTGAATCCGCGGGAGAAACCTCGGGGTGGGATCAAGATGACACGCAAAGGAAGAGGATGATCAACTCCAATAAGTACAGGAAAGAATATAGAGACATGAAGCTTTTCCAGTGGAAATTTGGGAAGCAGTACCTCATTACTCAGGACTTATGCAACCGTTATGATACAGTTTGGAAGGAAGATAGATGGTTCCTTTCCAACAAAATCCAGGAAAAGAAACTGGCAGGTACAACAAAGTATGAGAAGAAATTAATAGATCTTCTTTTGAGGAATTTGGAAAGATCAGAGTCACTGGAAGGGAAGCTCCTGCCAAGTTCAATCTTGGTGGGGTCTAAGGACTACCAGGTGAGGAAAAGAATGGGGAATGGGAGTCAGTACAAGGAGATTCAATGGTTAGGAGAAAACTTTGTCATAAGACATTTTTATGGAGACATTGAAGCTTTTGAACCCGAGATCAGAGAACATTTATCTCTTTCCCACCCACATATAATGGACTACCTTTGTGGTTTCAGTGATGAGGAGAAAAAAGAATGCTTTTTGTTGATGGAACTGATGAGCAAAACCCTTTCCGCACACATCAAAGATATTCATGGCCCAAGGAAGCGATTACCGTTCTTGCTTCATGTGGCAGTTGATCATATGCTTCAGATTGCCAGAGGAATGGAGTATCTGCATTCAAAGAAAGTATATCATGGAGAACTAAACCCTTCAAACATTCTTGTTACCCCTAGAGGTCATTCCCAAGAAGGTTACTTGCATGTCAAGGTATCAGGGTTCGGTCTACCTTCTGTGAAGGACTTGAGCCAGAAAGGGAATACAAATCAGAATGGATCTCTACCATTCATCTGGTATGCTCCTGAAGTCCTTGAAGAGCAAGAACAATCAGGAGGTGTAACAAACACCAAGTACACGGAGAAATCCGATGTGTACAGTTTTGGAATGGTTTGCTTTGAGCTTCTAACTGGCAAAGTCCCCTTTGAAGATAGTCATCTTCAAGGGGAGAAAATGAGTAGAAACATAAGGGCAGGAGAGAGACCACTTTTCCCGCTCAATTCACCAAAATATGTTATCAACTTGACAAAGAGATGTTGGCATACTGACCCAAGCCAGCGTCCGAGCTTCTCTTCCATATGTAGAGTTCTTCGTTATATAAAAAGATTTCTTGCAATGAATCCTGGTTACAACGGTCATCCAGACCCACCAATGCCACCAGTAGATTACTGTGATATAGAGTCAGTACTTTTGAGGAAATTTCCTTCTTGGGGAAGTTCTGAATCATCACCAGTTTCAATCATTCCGTTTCAAATCTTTGCCTACCAAGTTATAGAGCGAGAAAAAATAAGTACACACTCTAAGGATAACTCTGAATCGGGAAGTGATGCTTCAGCCTGTGGTGATGAACTTGTTACTTCAGGGGATGAGCCATTTCCATCCACAACTGAGAGGAAAGTTTTGGTTGGACATGATGGTATGAACAGGAAGATTACTTTGAACAGGAAATCTCTAGATTTGAAGATCACCAAACAACCAGGTACACCACGAGGGAGATCAGCCAGACCTCCACAAATGTCCCCTCGAGCACGAAGTCTGAGGGTTACTTCAGATAACCACATGATATCAAGTCCAAGGACAATAAGAAGAGTCTCTTCTGGTCATGTCTCAGACTCTGAGCTTTCTTAG 2049 0.4183 MEQFRQIGEALGSLKAMMVFRESIQINQRQCCLLLHVFTFAYESIADEITQNLKFEEKNAKWKALEQPLREIHRIFREGEAYIRHCLETKDWWAKAITLFHNKDCVEFHIHNLLCCMPILIEAIESAGETSGWDQDDTQRKRMINSNKYRKEYRDMKLFQWKFGKQYLITQDLCNRYDTVWKEDRWFLSNKIQEKKLAGTTKYEKKLIDLLLRNLERSESLEGKLLPSSILVGSKDYQVRKRMGNGSQYKEIQWLGENFVIRHFYGDIEAFEPEIREHLSLSHPHIMDYLCGFSDEEKKECFLLMELMSKTLSAHIKDIHGPRKRLPFLLHVAVDHMLQIARGMEYLHSKKVYHGELNPSNILVTPRGHSQEGYLHVKVSGFGLPSVKDLSQKGNTNQNGSLPFIWYAPEVLEEQEQSGGVTNTKYTEKSDVYSFGMVCFELLTGKVPFEDSHLQGEKMSRNIRAGERPLFPLNSPKYVINLTKRCWHTDPSQRPSFSSICRVLRYIKRFLAMNPGYNGHPDPPMPPVDYCDIESVLLRKFPSWGSSESSPVSIIPFQIFAYQVIEREKISTHSKDNSESGSDASACGDELVTSGDEPFPSTTERKVLVGHDGMNRKITLNRKSLDLKITKQPGTPRGRSARPPQMSPRARSLRVTSDNHMISSPRTIRRVSSGHVSDSELS* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1245 682 Pfam Protein tyrosine and serine/threonine kinase 269 503 IPR001245 GO:0004672|GO:0006468
Apr10g1245 682 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-LIKE 1 637 - -
Apr10g1245 682 MobiDBLite consensus disorder prediction 572 602 - -
Apr10g1245 682 ProSiteProfiles Protein kinase domain profile. 237 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1245 682 MobiDBLite consensus disorder prediction 620 682 - -
Apr10g1245 682 Gene3D Transferase(Phosphotransferase) domain 1 234 513 - -
Apr10g1245 682 PANTHER SERINE-THREONINE PROTEIN KINASE 1 637 - -
Apr10g1245 682 Pfam Protein of unknown function (DUF1221) 21 234 IPR010632 -
Apr10g1245 682 MobiDBLite consensus disorder prediction 650 682 - -
Apr10g1245 682 SUPERFAMILY Protein kinase-like (PK-like) 234 530 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1245 Apr-Chr10 24857673 24862772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1245 271 504 MAP Kinase Kinase Kinase AT5G58950 29.167 2.10e-23 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Apr10g1245 PK_Tyr_Ser-Thr 1.4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1245 - - gmx:100813704 1193.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1245 10 24857673 24862772 Apr10g1245 10 24857673 24862772 ECH