Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1226 ATGAGTGGAGAACCAATGCCATGTTCATATGCCTCTTGGCTAGGAAATCATCCTTCTGCCTTGGACAATTTTGACGAAGTGATGAGCATTGCCAAAGGAAAAAAGATTGTGGTGTTCTTGGACTATGATGGAACACTCTCACCGATTGTGAATGACCCTGATAAGGCTTACATGAGTGATTCTATGCGTTCGGCTGTACGTGAAATTGCTTCTCGTTTTCCCACTGCCATTGTTAGTGGAAGGAGTAGGGATAAGGTATATGGATTTGTGAAGCTAAAGAATCTTTGTTATGCTGGAAGCCATGGTATGGATATATCAACTCCATCAGACTCTTCAAAATATGGCAATCAGAATAATCAGACAAAGGCTATTGATGAAAAGGGTAATCAAGTTGTTCACTTTCATCCGGCAAAAGATTTTTTACCTACAATCCAAGAGATAATTAAGGTTTTGAAAGAAAATATTAAAAGAATAAAGGGCTCTAGCATTGAGGATAATACGTTCTGCGTCACGGTACACTATCGGCGTGTGAAGAAGGATGAGGATGTGGATGTTCTTGAAGAAATTGTGAAGTCTGTTATGACAGATTATCCCAATTTTAAAATTTCAGAAGGAAAAAAGGTTATGGAGATACGTCCAAGAATAGATTGGAATAAAGGTTCTGCTCTAAAGTATTTGCTTGACACTTTCGGCTTTGACAATTTTAATAATGTTCTTCCGATGTACATTGGGGATGACAAAACAGATGAAGATGCTTTTAAGGTTATCAGAGACAGTGGAATTCCCATCGTTGTTTCTGACATTGCAAAGGACACCAACGCTGCTCATTCTCTGCGTGACCCTTCCGATGTTGAGAAATTTTTGATTCGTTTAGCAAAATGGAAGAACAACTAG 894 0.387 MSGEPMPCSYASWLGNHPSALDNFDEVMSIAKGKKIVVFLDYDGTLSPIVNDPDKAYMSDSMRSAVREIASRFPTAIVSGRSRDKVYGFVKLKNLCYAGSHGMDISTPSDSSKYGNQNNQTKAIDEKGNQVVHFHPAKDFLPTIQEIIKVLKENIKRIKGSSIEDNTFCVTVHYRRVKKDEDVDVLEEIVKSVMTDYPNFKISEGKKVMEIRPRIDWNKGSALKYLLDTFGFDNFNNVLPMYIGDDKTDEDAFKVIRDSGIPIVVSDIAKDTNAAHSLRDPSDVEKFLIRLAKWKNN* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1226 297 CDD HAD_TPP 37 286 - -
Apr10g1226 297 SUPERFAMILY HAD-like 37 294 IPR036412 -
Apr10g1226 297 Pfam Trehalose-phosphatase 39 281 IPR003337 GO:0003824|GO:0005992
Apr10g1226 297 TIGRFAM T6PP: trehalose-phosphatase 33 292 IPR003337 GO:0003824|GO:0005992
Apr10g1226 297 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 8 297 - -
Apr10g1226 297 Gene3D - 38 278 IPR023214 -
Apr10g1226 297 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 8 297 IPR044651 GO:0004805|GO:0005992
Apr10g1226 297 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 38 260 IPR006379 -
Apr10g1226 297 Gene3D - 118 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1226 Apr-Chr10 24666775 24669338 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1226 23 292 Trehalose Biosynthesis Gene Families AT1G23870 24.138 1.21e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1226 K01087 - gmx:100799466 437.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1226 10 24666775 24669338 Apr10g1226 10 24666775 24669338 ECH