Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1212 ATGGAGCAACAGCCACAGAGCGCCGCCGAAGACGACTCAACCGCTACCACAAGCTCCGCCGATAAGCCCGCAGCTACACGCGGCGGCACGCGCCACCCCCTCTTCCGCGGCGTGCGTAAGCGCCGCTGGGGTAAATGGGTCTCCGAAATTCGGGAGCCGCGTAAGAAGTCGCGCATATGGCTCGGCTCCTTTCCTGCGCCGGAGATGGCGGCGAAAGCCTACGACGTCGCCGCCTACTGCCTCAAAGGCCGCAAGGCGCAGCTCAACTTTCCCGACGAGGTGCACCACTTGCCACCGCTCCCGCCGCCGTCAGCCTGCACGGCCAGAGATATTCAAGCCGCCGCGGCCAAGGCGGCGCACATGATGATGGTCAAGGTCGCCGCCTCTTCCTCGCCGGAGAAGAGCAGCATTGCTTCCGACGGCGACGGCGACGATTTTTGGGGCGAGATAGAGCTGCCGGAGCTCATGAACAGCAAGTGGTGGACTTCCTACGGCGACATCACGGTGTTGCCGGAGGTTGAGCTTCCACCGCAGCAACCTTTCACGACGGCGTGTTTATAG 561 0.6364 MEQQPQSAAEDDSTATTSSADKPAATRGGTRHPLFRGVRKRRWGKWVSEIREPRKKSRIWLGSFPAPEMAAKAYDVAAYCLKGRKAQLNFPDEVHHLPPLPPPSACTARDIQAAAAKAAHMMMVKVAASSSPEKSSIASDGDGDDFWGEIELPELMNSKWWTSYGDITVLPEVELPPQQPFTTACL* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1212 186 MobiDBLite consensus disorder prediction 1 24 - -
Apr10g1212 186 Gene3D AP2/ERF domain 34 92 IPR036955 GO:0003700|GO:0006355
Apr10g1212 186 PRINTS Ethylene responsive element binding protein signature 35 46 IPR001471 GO:0003700|GO:0006355
Apr10g1212 186 PRINTS Ethylene responsive element binding protein signature 73 93 IPR001471 GO:0003700|GO:0006355
Apr10g1212 186 MobiDBLite consensus disorder prediction 1 36 - -
Apr10g1212 186 SUPERFAMILY DNA-binding domain 34 93 IPR016177 GO:0003677
Apr10g1212 186 ProSiteProfiles AP2/ERF domain profile. 34 91 IPR001471 GO:0003700|GO:0006355
Apr10g1212 186 Pfam AP2 domain 33 83 IPR001471 GO:0003700|GO:0006355
Apr10g1212 186 SMART rav1_2 34 97 IPR001471 GO:0003700|GO:0006355
Apr10g1212 186 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 3 186 - -
Apr10g1212 186 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 3 186 - -
Apr10g1212 186 CDD AP2 33 92 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1212 Apr-Chr10 24482080 24482897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1212 30 158 AP2-EREBP Transcription Factor Family AT1G01250 67.692 8.95e-53 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Apr10g1212 AP2 7.7e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1212 K09286 - gmx:100806544 278.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1212 10 24482080 24482897 Apr10g1212 10 24482080 24482897 ECH
Apr4g0933 4 7570329 7570947 Apr10g1212 10 24482080 24482897 PCT