Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1200 ATGAATTCTGGTGCTGTGTTAGCATTGCCTCCTGTGAGCAATGTGTTCGACACAAGGGAGTCTCTTGATTTTGAGGATGACTTTGTAGAGAAAGATCCAACCGGCCGGTACCTAAGGTACAATGAAATCTTGGGCAAGGGTGCCTTCAAGACCGTTTATAGGGCCTTTGATGAAGTTGATGGAATTGAAGTTGCTTGGAACCAAGTTAAGATTGATGGCCTCTTTCATTCAGTAGATGATCTTGCAAAATTGTATTCTGAAGTTCATCTTTTGAAGTCTTTGAAACATGAAAATATCATTAAATTCTATAATTCCTGGATTGATGATAGGCAGAAAACTGTTAATATGATTACTGAACTCTTCACTTCCGGAAATTTAAGGCAATATCGTAAGAGGCATAAATATGTTGAAATGAAAGCTATAAAAGGTTGGGCCAGGCAGATTCTTCAAGGCTTGGTATATCTTCACGGTCACAAGCCACCTATTATTCACAGAGACTTGAAATGTGACAACATCTTTGTGAATGGAAACCAAGGAGAAGTTAAGATAGGAGACCTTGGCTTAGCAATTGTCATGCAACAACCAACTGCTCGAAGTGTTATTGGGACTCCTGAGTTTATGGCTCCAGAACTATATGAAGAGGAATACAATGAGCTTGTCGATATCTATTCTTTTGGGATGTGCATACTGGAGATGGTTACTCTTGAGTATCCCTATAGTGAATGCAAAAATCCTGCTCAAATCTTTAAGAAAGTTACCTCGGGCATCAAACCTGCTTCCCTTAATAAAGTGAGTGACCCCCAAATTAGGCAGTTTATTGAGAAATGTTTGGTTCCAGCATCTAAGAGATTGCCGGCAGAGGAGCTTCTTAAAGACCCATTTCTACATGTTGAGAATCCAAAGGATCCAGTCCTTTATCCTTTACAATCACCTAGCAAAACATCAAGAGGTATAAATTCATCCAAGTTTAGTTCTCAGTCTACGGACATGGATGCTGACTACAAACAGTTTTCTCTGAGTAACTGTTCTGAAAGCAACCAGGGAAGCTCATTTTGTCCTGTTTTTGAAGTCCAGAGGACAAATAAGAACAACCAGTTTAGGTTGAAAGGGACTAAAAATGATGACAACTCAATATCATTGACCTTGCGTATTGCTGATACTTGTGGTCGAGTAAGAAACATACATTTTCTCTTTTACCTTGATACAGATACTGCAGTCTCTGTGGCCTCGGAGATGGTTGAACACTTGGAACTGGCAGATCATGATGTAGCTTTCATAGCTGAGCTTATTGATTACTTGATATTCAAACTTCTCCCTTGGTGGAAGCCTGCACCTGATCATCGCTCGAGTGGAGAATTAAGTCTTTGTGGTACAAATGTAGATAGCCAAAACTCAATGGCATGCCCGTGGGGTTCTGTCCTCACCAGTATTCCCTCTGAATTGGTTGTTGGTCAAGACGGCTTCTCTGGGTTTAATACAACTCCCACAGACAATTTTGTGACAGCAGATAAGTGCGGCATTTTCAACTATGCTGATAATGATACTTTCGAGAGCGAATATAATTCTTCTCCTAGTCTGACTAACATGGAAGACCAATGTTCCCAAGGATCTAGAGCTTCTGAGATAGTTGTTGAAAATACTTCCATGAAAAGTGACAATTCTCGCGAATCCAATGTTGATGGAAGTTGTAAAAGCTTAAGTAGTTCCAATTCTGAACTTGAGGTTGGGGCGGATGATTTTGAGGACTGTAAATTGCATGCAATAGATTGCTGCGCTAAGGAAGGCCTTGTGATGAATGAATTCGCAAAGAACTCAGGGTCAGTTTGTGGAGCATCTACTAATTTTGGGAGCATGGCAAGTAGCTATTCCTCTGTGTCTTCAATAGACAAGGACATTGATCTTGAGCTAAAGTTTGAACTTGATGTAATTGAGTCACACTATCAGCATTGGATTGATGAACTTACTAAAATGAAGTTGGAGGCATTGGAAGCCACCAGAAGGAAATGGATGGCCAAGAAGAAATTGGATGTTCATTGA 2037 0.4026 MNSGAVLALPPVSNVFDTRESLDFEDDFVEKDPTGRYLRYNEILGKGAFKTVYRAFDEVDGIEVAWNQVKIDGLFHSVDDLAKLYSEVHLLKSLKHENIIKFYNSWIDDRQKTVNMITELFTSGNLRQYRKRHKYVEMKAIKGWARQILQGLVYLHGHKPPIIHRDLKCDNIFVNGNQGEVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYEEEYNELVDIYSFGMCILEMVTLEYPYSECKNPAQIFKKVTSGIKPASLNKVSDPQIRQFIEKCLVPASKRLPAEELLKDPFLHVENPKDPVLYPLQSPSKTSRGINSSKFSSQSTDMDADYKQFSLSNCSESNQGSSFCPVFEVQRTNKNNQFRLKGTKNDDNSISLTLRIADTCGRVRNIHFLFYLDTDTAVSVASEMVEHLELADHDVAFIAELIDYLIFKLLPWWKPAPDHRSSGELSLCGTNVDSQNSMACPWGSVLTSIPSELVVGQDGFSGFNTTPTDNFVTADKCGIFNYADNDTFESEYNSSPSLTNMEDQCSQGSRASEIVVENTSMKSDNSRESNVDGSCKSLSSSNSELEVGADDFEDCKLHAIDCCAKEGLVMNEFAKNSGSVCGASTNFGSMASSYSSVSSIDKDIDLELKFELDVIESHYQHWIDELTKMKLEALEATRRKWMAKKKLDVH* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1200 678 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 378 433 IPR024678 GO:0004674|GO:0005524
Apr10g1200 678 Gene3D - 376 442 - -
Apr10g1200 678 Gene3D Transferase(Phosphotransferase) domain 1 121 300 - -
Apr10g1200 678 SMART serkin_6 38 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1200 678 ProSiteProfiles Protein kinase domain profile. 38 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1200 678 MobiDBLite consensus disorder prediction 308 327 - -
Apr10g1200 678 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 2 678 - -
Apr10g1200 678 PANTHER KINASE DOMAIN PROTEIN 2 678 - -
Apr10g1200 678 Gene3D Phosphorylase Kinase; domain 1 21 119 - -
Apr10g1200 678 Pfam Protein kinase domain 41 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1200 678 CDD STKc_WNK 36 295 - -
Apr10g1200 678 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Apr10g1200 678 SUPERFAMILY Protein kinase-like (PK-like) 39 348 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1200 Apr-Chr10 24311814 24316032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1200 25 438 MAP Kinase Kinase Kinase AT5G41990 62.560 1.35e-173 505
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Apr10g1200 Pkinase 4.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1200 K08867 - gmx:100809602 1040.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1200 10 24311814 24316032 Apr10g1200 10 24311814 24316032 ECH