Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1187 ATGGGTTCAAATGTCAAAACTTTTACCTTTGAGGAGGTGGCGAAGCACAACAACAAGAATGATTGCTGGATTATAGTCAATGGGAAGGTATATGATGTCACCGCATTTTTGGATGATCATCCAGGAGGTGATGAAGCTTTACTGACTGCTACAGAGAAGGATGCCACCACTGATTTTGAAGATGTTGGCCACAGTGATTCAGCAATTGAGATGATGCAAACATACTTTGTTGGTGAGGTTGACACCAACACTCTTCCTGCAAAAGTTAACAACAATCCACCACCACCAACACTAGCACCAGCACCAGCCTATAACAATCAATCTTCTGGATTTATTGTGAAGATGTTGCAGTACCTTGTGCCATTGCTCTTGTTGGCTGCCGCATTTGTTATTCAGTTCTATGCCAAGAAAACAAGTCCAACAAACGGTGAAAACTGA 438 0.4224 MGSNVKTFTFEEVAKHNNKNDCWIIVNGKVYDVTAFLDDHPGGDEALLTATEKDATTDFEDVGHSDSAIEMMQTYFVGEVDTNTLPAKVNNNPPPPTLAPAPAYNNQSSGFIVKMLQYLVPLLLLAAAFVIQFYAKKTSPTNGEN* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1187 145 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 90 IPR036400 -
Apr10g1187 145 PANTHER CYTOCHROME B5 ISOFORM C 1 138 - -
Apr10g1187 145 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Apr10g1187 145 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Apr10g1187 145 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Apr10g1187 145 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Apr10g1187 145 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Apr10g1187 145 Gene3D - 2 84 IPR036400 -
Apr10g1187 145 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Apr10g1187 145 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 80 IPR001199 -
Apr10g1187 145 PANTHER CYTOCHROME B5 1 138 - -
Apr10g1187 145 SMART Cyt_b5_2 8 81 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1187 Apr-Chr10 24205547 24209121 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1187 1 142 NADPH P450 reductases AT5G48810 54.225 1.56e-56 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1187 K23490 - gmx:100305546 206.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0950 4 7713810 7715646 Apr10g1187 10 24205547 24209121 PCT