Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1186 ATGACAACCCACATTGATAACCTCTGGTGGGTGTTAGCCTTATCCTCCAAATGCACACAAGAAAACATTGCATGCTCTGTTCTCATAATCGCTTCACTGTGTCTCATAACCATGACTCTCTTCTACTGGTCTCACCCTGGTGGTCCTGCTTGGGGTAAGTACTACTCAACTTGGACAAAATCAAACAACAAAATCATTCCTGGTCCAAAAGGGTACCCTGTGATTGGGAGCATGAATCTCATGCTCTCACTCGCGCACCACCGTATTGCTGCCGCAGCAAAAGCATGCAACGCCAAGAGACTCATGGCTTTCAGCCTCAGCGACACACGTGTCATCGTCACGTGCCACCCTGACGTCGCTAAAGAGATTCTCACCAGTTCCGTTTTCGCTGATCGTCCCATAAAGGAATCCGCTTACAGTCTCATGTTCAACCGCGCCATAGGCTTCGCCCCTTACGGCGTTTACTGGCGCACCCTCCGAAGAATCGCCACCACCCACCTCTTCTGCCCCAAGCAAATCAAAGCCTCCATACTCCAACGCGCCGAAATCGCCACTCAAATGATCCACTCCTTCAAAAACCACCATGGCGGTTTCCAGGTTCGCCAGGTTCTAAAAAAAGCTTCGCTGAATAACATGATGTGGTCCGTGTTTGGACAGAGGTATAAGCTAGACGAGCCAAACAGTGGAATGGAAGAGTTAAGAGGGTTAGTGGAACAAGGGTACGACTTGTTGGGTACCCTTAATTGGGGTGACCATATCCCTTTTCTCAAAGACTTTGACCTTCAAAAAATCCGGTTCACTTGCTCCAAACTCGTCCCTAAGGTGAACCGGTTCGTTAGTACAATCATCGCCGACCACCGAGCCGACAAAACCCAAACCAACCGGGATTTCGTGCATGTCTTGCTCTCTCTCCAAGGACCCGATAAATTGTCTGACTCCGACATGATTGCGGTACTATGGGAGATGATATTTAGGGGGACCGACACGGTGGCAGTTTTGATCGAGTGGATACTAGCGAGGATGGTGCTTCATCCTGAGGTGCAGAGGATGGTGCAAGAGGAGCTTGACGAGGTGGTTGGCGGCGGTGCTGTGACGGAGGAGGACGTGGCGGCGATGGTGTACCTGCCGGCGGTGGTGAAGGAGGTTTTGAGGCTGCATCCTCCGGGCCCACTTCTCTCGTGGGCCCGTTTGGCCATCACTGATACGACCATTGATGGGTATCACGTGCCAGCTGGGACCACGGCCATGGTTAATATGTGGGCCATAGCTAGGGACCCAGAGGTGTGGAGGGACCCACTTGAATTTATGCCCGAGAGATTCGTCGACGGAGAGCCCGACTTTTCGGTTTTTGGGTCGGATCTGAGACTCGCCCCGTTCGGGTCGGGAAGGAGGACTTGCCCCGGGAAGACTTTGGGTTTGAGCACTGTGACCTTCTGGGTGGCTAGGCTTTTGCACGAGTTTGAATGGGTACCGTGTGATGAAGGGAATGGGGTTGATCTAACGGAGGTGCTTAGGCTCTCTTGTGAAATGGCTAACCCTCTCACTGTTCAAGTGCGTCCTAGGCGTGCCTATTAA 1575 0.5225 MTTHIDNLWWVLALSSKCTQENIACSVLIIASLCLITMTLFYWSHPGGPAWGKYYSTWTKSNNKIIPGPKGYPVIGSMNLMLSLAHHRIAAAAKACNAKRLMAFSLSDTRVIVTCHPDVAKEILTSSVFADRPIKESAYSLMFNRAIGFAPYGVYWRTLRRIATTHLFCPKQIKASILQRAEIATQMIHSFKNHHGGFQVRQVLKKASLNNMMWSVFGQRYKLDEPNSGMEELRGLVEQGYDLLGTLNWGDHIPFLKDFDLQKIRFTCSKLVPKVNRFVSTIIADHRADKTQTNRDFVHVLLSLQGPDKLSDSDMIAVLWEMIFRGTDTVAVLIEWILARMVLHPEVQRMVQEELDEVVGGGAVTEEDVAAMVYLPAVVKEVLRLHPPGPLLSWARLAITDTTIDGYHVPAGTTAMVNMWAIARDPEVWRDPLEFMPERFVDGEPDFSVFGSDLRLAPFGSGRRTCPGKTLGLSTVTFWVARLLHEFEWVPCDEGNGVDLTEVLRLSCEMANPLTVQVRPRRAY* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1186 524 PANTHER CYTOCHROME P450 78A6 1 523 - -
Apr10g1186 524 PRINTS E-class P450 group I signature 207 225 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1186 524 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1186 524 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1186 524 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1186 524 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1186 524 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1186 524 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1186 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Apr10g1186 524 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1186 524 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1186 524 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1186 524 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1186 524 PANTHER CYTOCHROME P450 78A7-RELATED 1 523 - -
Apr10g1186 524 Gene3D Cytochrome P450 57 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1186 524 SUPERFAMILY Cytochrome P450 66 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1186 524 Pfam Cytochrome P450 67 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1186 Apr-Chr10 24194818 24197046 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1186 11 523 Cytochrome P450 AT2G46660 66.034 0.0 678
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1186 K20619 - gmx:100798388 854.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1186 10 24194818 24197046 Apr10g1186 10 24194818 24197046 ECH