Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1184 ATGTTGGAGAGTGGAGAATACAACTTTGAAGAGGTTCCCGTAACGAATCATCATTGTCGTCGCCGCCACCACCCAAAAAAGAAAGTGATCGTCAAAGATATACCAAAAGGGTTTTTGCCAATCAAGGTTGGGCAAGGTGAAGAGCAACATAAAATTATGGTGCCCGTGATGTACCTCAACCACCCACTTTTTTCTCAGCTACTTAAGGAGGCAGAGGAAGAGTATGGTTTTGATCAGCAAGGAACCATAATTATCCCTTGTCATGTGGAGGAGTTTAGGTACGTTCAAGATCTCATTAATAGGGACAAATCACCCCAACACCACCACCATCACCATGTCATAAGCTGTTTCAGGCCCTCACGTCAACAAGATCAAATATAG 381 0.4357 MLESGEYNFEEVPVTNHHCRRRHHPKKKVIVKDIPKGFLPIKVGQGEEQHKIMVPVMYLNHPLFSQLLKEAEEEYGFDQQGTIIIPCHVEEFRYVQDLINRDKSPQHHHHHHVISCFRPSRQQDQI* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1184 126 Pfam Auxin responsive protein 29 98 IPR003676 GO:0009733
Apr10g1184 126 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY 22 114 - -
Apr10g1184 126 MobiDBLite consensus disorder prediction 103 126 - -
Apr10g1184 126 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 22 114 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1184 Apr-Chr10 24139545 24139925 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1184 33 99 Calmodulin-binding Proteins AT3G43120 47.761 3.07e-17 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1184 K14488 - gmx:100808516 167.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1184 10 24139545 24139925 Apr10g1184 10 24139545 24139925 ECH
Apr10g1184 10 24139545 24139925 Apr4g0952 4 7720184 7720747 ECH
Apr4g0953 4 7726332 7726904 Apr10g1184 10 24139545 24139925 PCT