Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1183 ATGGGTATAGGGGAGAAGAGTCCAAGGAGCTTTCATCGCTACAATAACCACCATAAGCAAGAGTTCAGAGATGTTCCAAAAGGGTGCATGGCCATCAAGGTGGGTCAAGGAGAGGAGCAACAAAGATTCGTTGTTCCTGTCATATACATCAATCACCCTCTCTTCATGCAGTTGTTGAAGGAGGCTGAAGAAGAATATGGATTTGATCAGAAAGGAACCATAACAATCCCTTGCCATGTTGAAGAATTCAGAAACGTTAGGGGCTTGATTGATAGGGACAAGTCCCTTCATCACCACCATCACCACCATGTTGGGTGCTTTGGATTTTGA 330 0.4455 MGIGEKSPRSFHRYNNHHKQEFRDVPKGCMAIKVGQGEEQQRFVVPVIYINHPLFMQLLKEAEEEYGFDQKGTITIPCHVEEFRNVRGLIDRDKSLHHHHHHHVGCFGF* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1183 109 PANTHER SMALL AUXIN-UP RNA-RELATED 17 104 - -
Apr10g1183 109 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 17 104 IPR003676 GO:0009733
Apr10g1183 109 Pfam Auxin responsive protein 19 86 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1183 Apr-Chr10 24127227 24128057 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1183 24 84 Calmodulin-binding Proteins AT5G20810 55.738 8.92e-19 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1183 - K14488 gmx:111188139 176.407