Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1177 ATGGGGAAGAAGGGAAGTGGTAGTTCATGGTTAACCGCTGTCAAAAGGGCATTCAGATCTCCCACCAAAGACAGTGACAAAAGGAGTGGCAGAAGAAGAGAAGAGTGTGATCAAGAAGAGGACGAAGAGAAGGTGAGTGTTTTTTGTTTTTCTAGAAAATTAACCCTCTTTTTAAAAATTTTATTTTTGCAGAAGAGAGAAAAAAGAAGATGGATTTTTAGGAAACCTGTGAGTCATGAAGCAGTGAACACGCAGCAGAAGTTGAAGCATGATGTGGCTGCAAGTGGGGCTTCAAGGAATGACCAAGATCAAAAGCATGCACTTGCAGTGGCTGTGGCCACTGCAGAAGCTGCCATGGCCACTGCTCAGGCTGCGGTTGAGGTGGCAAGGTTGACCAAACCTGCTAACCATGCCAGGCAGCATTATGCCGCGATTGTGATTCAAACCGCTTTTAGAGGGTATCTGGCAAGAAGAGCACTTCGTGCACTAAAGGGGTTAGTGAAGTTGCAAGCTTTGGTGAGGGGTCACAATGTTAGGAAGCAAGCAAAGATGACGCTTAGGTGCATGCAAGCTTTGGTTAGAGTTCAAGCAAGGGTGGTTGATCAGCGCATAAGGTCTTCACTTGAAGGCAGTAGAAAATCAACTTTCAGTGACACCACTAGTGTTTGGGACTCCCGGTATCTTCAGGACATTTCAGATAGGAAATCAATGTCAAGAGAGGGAAGCAGCATTGCAGATGATTGGGATGAACGGCCTCACACGGTTGAAGAAGTCAAGGCCATGTTGCAGCAAAGGAAGGAAGCAGCTATGAAGAGGGACAAGACCTTGTCCCAAGCCTTTTCACAACAGATTTGGAGGAATGGTAGGACATCATCAATTGGTAATGAAGATGAGCTTGAAGACAGACCGAAATGGCTGGACCGGTGGATGGCGACGAAGCCGTGGGAGAGCAGGGGAAGGGCTTCAACTGATCAAAGAGACCCCATTAAGACTGTGGAAATTGACACCTCTCAGCCTTATTCATATCTTGGAACCAATTACAGAAGATCACATCCAAATTATCAGTATAACCCACCCCACCAACCTCAAAGGCATTCCATTGCTTCACCACTCCATAGAACCCACCAAAATGGATCCATTCACCAATCCCCTGCAACCCCTTCTCCAGCCAAATCAAGACCCATCCAAGTCCGGTCCGCAAGCCCAAGATGTGTCAGAGAAGATAGAAGCTACCACACCTCTCAAACACCAAGCCTAAGGTCTAATTATCATTACACAGGAAACTTGTACCAAAATGGAAGGGCTGGAACAAGTAGTGGTGGTGGTGGTGCATTGCCTAATTACATGGCAGCAACTGAGTCTGCCAAGGCTCGAATTCGATCCCAGAGTGCGCCAAGGCAGAGGCCATCCACGCCAGAGAGGGACAGAGCTGGATCAGCAAAGAAAAGGCTTTCTTTTCCTGCTCCTGATCCTTATAGTGTAGGGGTGAGTTATGGAAATTATGGGCACAGTCTAAGGAGTCCAAGCTTCAAGAGTGTGAGTGGATCACATTTTGGGTTGGAGCACCATTCCAATTACTCATCTTGCTGCACTGAGAGCCTTGGTGGTGAGGTTTCTCCTTCTTCAACTGGTGACCTTAGAAGGTGGTTGAGATGA 1656 0.4716 MGKKGSGSSWLTAVKRAFRSPTKDSDKRSGRRREECDQEEDEEKVSVFCFSRKLTLFLKILFLQKREKRRWIFRKPVSHEAVNTQQKLKHDVAASGASRNDQDQKHALAVAVATAEAAMATAQAAVEVARLTKPANHARQHYAAIVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVVDQRIRSSLEGSRKSTFSDTTSVWDSRYLQDISDRKSMSREGSSIADDWDERPHTVEEVKAMLQQRKEAAMKRDKTLSQAFSQQIWRNGRTSSIGNEDELEDRPKWLDRWMATKPWESRGRASTDQRDPIKTVEIDTSQPYSYLGTNYRRSHPNYQYNPPHQPQRHSIASPLHRTHQNGSIHQSPATPSPAKSRPIQVRSASPRCVREDRSYHTSQTPSLRSNYHYTGNLYQNGRAGTSSGGGGALPNYMAATESAKARIRSQSAPRQRPSTPERDRAGSAKKRLSFPAPDPYSVGVSYGNYGHSLRSPSFKSVSGSHFGLEHHSNYSSCCTESLGGEVSPSSTGDLRRWLR* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1177 551 MobiDBLite consensus disorder prediction 19 37 - -
Apr10g1177 551 Gene3D - 137 192 - -
Apr10g1177 551 MobiDBLite consensus disorder prediction 411 425 - -
Apr10g1177 551 MobiDBLite consensus disorder prediction 316 425 - -
Apr10g1177 551 MobiDBLite consensus disorder prediction 1 37 - -
Apr10g1177 551 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 137 184 IPR027417 -
Apr10g1177 551 Pfam IQ calmodulin-binding motif 167 183 IPR000048 GO:0005515
Apr10g1177 551 Pfam IQ calmodulin-binding motif 143 161 IPR000048 GO:0005515
Apr10g1177 551 MobiDBLite consensus disorder prediction 316 331 - -
Apr10g1177 551 PANTHER IQ-DOMAIN 5-RELATED 63 551 - -
Apr10g1177 551 Pfam Protein of unknown function (DUF4005) 401 501 IPR025064 -
Apr10g1177 551 MobiDBLite consensus disorder prediction 453 489 - -
Apr10g1177 551 PANTHER PROTEIN IQ-DOMAIN 1-LIKE ISOFORM X1 63 551 - -
Apr10g1177 551 SMART iq_5 139 161 IPR000048 GO:0005515
Apr10g1177 551 SMART iq_5 162 183 IPR000048 GO:0005515
Apr10g1177 551 MobiDBLite consensus disorder prediction 529 551 - -
Apr10g1177 551 MobiDBLite consensus disorder prediction 332 395 - -
Apr10g1177 551 ProSiteProfiles IQ motif profile. 140 168 IPR000048 GO:0005515
Apr10g1177 551 ProSiteProfiles IQ motif profile. 164 191 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1177 Apr-Chr10 24050659 24053854 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1177 1 551 IQD Protein Family AT1G01110 55.342 1.33e-178 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1177 - - gmx:100786729 887.486
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1177 10 24050659 24053854 Apr10g1177 10 24050659 24053854 ECH