Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1164 ATGGAAGCACAACGAAGGAAGGTTTGCGGTGAAGCACCATGTGGGTTTGCAGATGCTGGATCCATCTCTAAGGATTCTGAAGAACGATCAACTTCTATGCGAAAGCTTCTCATGGCAGTGGTCCTTTGTGTTGTTTTCATGACCATTGAAGTAGTTGGTGGCATCAAAGCTAACAGTCTTGCAATATTGACTGATGCAGCACATTTACTTTCAGATGTTGCAGCCTTTGCCATCTCTTTATTTTCTTTATGGGCTGCTGGATGGGAAGCTACTCCTCGCCAGTCTTATGGATTTTTTAGAATTGAGATTCTTGGTGCTTTGGTTTCTATCCAATTAATATGGTTGCTTGCTGGGATTTTGGTATATGAAGCCATCGATAGAATCATTGCTGGTCCTAAAAGTGTCGATGGTTTTCTTATGTTTTTAGTTGCTGCATTTGGTCTTGTGGTTAACATCATCATGGCTTTGTTATTGGGTCATGATCATGGCCATGGACATGACGGTCACGGTCACGGACACGGTCATGATCATGGTCATGGCCACAAAGAGCTTGCTGAACCACTCCTTGGTGAATCAGAAGACGGATCTAAGAAGAAGAAGCAATGGAACATAAATGTACAGGGGGCTTATCTACATGTACTTGGGGACTCTATCCAGAGTGTTGGCGTAATGATCGGGGGAGCAATGATATGGTATAACCCTCGTTGGCAAATAGTTGATTTAATTTGCACACTAATATTTTCAGTAATTGTTCTGGGGACAACTATCAATATGCTGCGAAACATTTTGGAAGTCCTGATGGAGAGCACACCACGTGAGATAGATGCTACTCAGCTTGAACAGGGCCTGTTGAATATGGAAGATGTAGTGGCTGTTCATGAGCTGCACATCTGGGCCATCACGGTGGGAAAGATTTTGCTAGCGTGTCATGTTAAAATCAGACGTGAAGCTGATGCTGATGTTGTGCTGGACAAGGTTATAGACTATATCAAAAGGGTTTATAACATCAGTCATGTAACTATACAGATAGAGCGCTAG 1038 0.4287 MEAQRRKVCGEAPCGFADAGSISKDSEERSTSMRKLLMAVVLCVVFMTIEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEATPRQSYGFFRIEILGALVSIQLIWLLAGILVYEAIDRIIAGPKSVDGFLMFLVAAFGLVVNIIMALLLGHDHGHGHDGHGHGHGHDHGHGHKELAEPLLGESEDGSKKKKQWNINVQGAYLHVLGDSIQSVGVMIGGAMIWYNPRWQIVDLICTLIFSVIVLGTTINMLRNILEVLMESTPREIDATQLEQGLLNMEDVVAVHELHIWAITVGKILLACHVKIRREADADVVLDKVIDYIKRVYNISHVTIQIER* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1164 345 Gene3D Cation efflux protein transmembrane domain 32 266 IPR027469 -
Apr10g1164 345 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 273 344 IPR036837 -
Apr10g1164 345 PANTHER METAL TOLERANCE PROTEIN A1 177 345 - -
Apr10g1164 345 PANTHER METAL TOLERANCE PROTEIN A1 4 180 - -
Apr10g1164 345 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 4 180 - -
Apr10g1164 345 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 177 345 - -
Apr10g1164 345 Pfam Cation efflux family 36 267 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Apr10g1164 345 SUPERFAMILY Cation efflux protein transmembrane domain-like 30 268 IPR027469 -
Apr10g1164 345 TIGRFAM CDF: cation diffusion facilitator family transporter 33 345 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1164 Apr-Chr10 23880939 23884590 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1164 7 345 Inorganic Solute Cotransporters AT2G46800 71.164 3.22e-179 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1164 K14689 - gmx:100790458 578.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1164 10 23880939 23884590 Apr10g1164 10 23880939 23884590 ECH