Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1157 ATGGAGTTGGGAGGGGTTCGGTTGATCGGGGATTACATATTGGGTCCTCGAATCGGGTCGGGTTCGTTTGCGGTGGTGTGGCATTCAAGGCATCGACACTCGGGTTTGGAGGTTGCGGTTAAGGAGATTGATAAGAGACAACTCAGTTCCAAAGTCAGAGACAATCTTCTCAAAGAGATTTCTATTCTCAGCACAATCCATCACCCCAACATCATTCGACTCTTCGAAGCTATTCAGACCGATGACAGGATTTACCTTGTTTTGGAGTATTGTGGTGGTGGGGACCTTGCTGCTTACATTCATCGCCATGGCAAAGTTTCTGAACCCGTTGCTCGCCATTTCATGAGGCAATTGGCTGCTGGTTTGCAGGTGCTTCATGAAAAAAACCTCATTCATAGAGATTTAAAACCACAGCTTGTCAGGAAACTTTGCTTCTTTGCTTCTTTTCTTCGAGATTTGCACACCAAGGAGGGTAAATCTATACCAATTATGAAAATAGGGGATTTTGGTTTTGCAAGGTCTCTTACACCCTGGGGGTTGGCAGATACGCTATGTGGTTCACCTTATTACATGGCTCCAGAGATAATAAACTGTCAACAGTATGGTGCCAAGGCTGATTTATGGAGTGTTGGGGCAATATTGTATCAGCTGGTGATTGGGAGGCCGCCATTTGATGGAAATAGTCAATTGCAGCTTTTTCAAAATATTTTGGCATCCACTGAGCTGCACTTTCCGCCAGAGGCTTTAAAAGAGCTACATTCTGATTGCTTGGATCTTTGCAGAAACCTTCTACGTCGAAACCCAGATGAGAGATTAACATTCATGGCTTTCTTCAATCACAATTTCCTACAGGAATCCAGGTCAACTGTGAATTTTGAGCAGTTTCAATTACATCAATCAGAAAAATCAGTGGTTCATCAATTAGGTGGTTCTGCCTCTGAGAAGGTGTCTCAAACCCATTCTGATTGTCATATTGAGTCATTTTTAGATGATCCAGTGGTAGTCAGTTCAGCCATATATGGGACTATGCTGTCACAAAGAAAGGATGGCAAGATCATAGCTGACACAAAGAGTGTTAAAGTTTCCCGTTTAATGAAGTCCATTGAAAGAGATTATGTCATTGTCGATTCTCATTTTGCATCATTGGAGGCTTTCTCTGACTACTTTGAGGCATCTGTGCAAGATAACACCTCAAGCATGACTTCTATATTTCCTTTAAAGAGGACTAACCTGGAGATTGATGTTGCTTTGCAACCAAAGGATCAGTCATCTTCCTCAACTGGCAGATTGGAAAATTTAGAAGGCAATGAACATGGGGCATCAGTGGCATCCTCTGAATTTGCCTCCTTAAGGAGAGAGCAGGGAAGTTCCTCACTTCACCTTTCAAACAGGTTAGAGTTATTGCATCAGTATGTGCAGACCCTTGCAGAACTTTCACAAAAAAAGTGTAATTCAGGACTGTATCTTGAGTCACTTGCAATTGAGTTGGTGGTTTTGGCTATGTGGAAGAAAGCTCTTGAAATTTGTAGCTCTTGGGTAGTTTCCATTACCGAGGGTCAGTTGCCTACAAGCAGTTCAGCTAATGAATCCGCATTTGACCGCAGAGATGTGGGGTTATCACTGACAGATTTTAGAGATCATCCTTCTGTTTTCTTGTGGGCCAAACACGAGTTTATTGTTGCTGTTGATCGTGCTGAAAGACTGTCATATCATATTAAAAGTATGGATGGGGCAGCTGAGATGCCAGATGCAATGGAAATTATATTCCAAAGAGCACTCTTATTCGGGACCAGTGGCGCTGTGGATGAATTGATGGAGAACAAAGATAGGGCCGTTGCATCTTACTCAAAAGCAATGCTTTTACTTTCTTTTATTGTGGGAGAAGCAGAGAACCTTCCACTGAACCCACCATTTTCCCTTCCTGCTGCTGATAAGGAGCGAATCTTGCAATATATTCGCTACTTGCAGTCTCATAAAAAATCTTCATCAGAGGCCTCTACAAAAGGAGCCCATACTCTCTTATCAAAGTAA 2031 0.4259 MELGGVRLIGDYILGPRIGSGSFAVVWHSRHRHSGLEVAVKEIDKRQLSSKVRDNLLKEISILSTIHHPNIIRLFEAIQTDDRIYLVLEYCGGGDLAAYIHRHGKVSEPVARHFMRQLAAGLQVLHEKNLIHRDLKPQLVRKLCFFASFLRDLHTKEGKSIPIMKIGDFGFARSLTPWGLADTLCGSPYYMAPEIINCQQYGAKADLWSVGAILYQLVIGRPPFDGNSQLQLFQNILASTELHFPPEALKELHSDCLDLCRNLLRRNPDERLTFMAFFNHNFLQESRSTVNFEQFQLHQSEKSVVHQLGGSASEKVSQTHSDCHIESFLDDPVVVSSAIYGTMLSQRKDGKIIADTKSVKVSRLMKSIERDYVIVDSHFASLEAFSDYFEASVQDNTSSMTSIFPLKRTNLEIDVALQPKDQSSSSTGRLENLEGNEHGASVASSEFASLRREQGSSSLHLSNRLELLHQYVQTLAELSQKKCNSGLYLESLAIELVVLAMWKKALEICSSWVVSITEGQLPTSSSANESAFDRRDVGLSLTDFRDHPSVFLWAKHEFIVAVDRAERLSYHIKSMDGAAEMPDAMEIIFQRALLFGTSGAVDELMENKDRAVASYSKAMLLLSFIVGEAENLPLNPPFSLPAADKERILQYIRYLQSHKKSSSEASTKGAHTLLSK* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1157 676 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 6 652 IPR045269 GO:0004674|GO:0006914
Apr10g1157 676 CDD STKc_ATG1_ULK_like 18 282 - -
Apr10g1157 676 PANTHER BNAC06G18300D PROTEIN 6 652 - -
Apr10g1157 676 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Apr10g1157 676 ProSiteProfiles Protein kinase domain profile. 12 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1157 676 Pfam Protein kinase domain 16 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1157 676 SUPERFAMILY Protein kinase-like (PK-like) 8 325 IPR011009 -
Apr10g1157 676 Gene3D Transferase(Phosphotransferase) domain 1 6 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1157 Apr-Chr10 23811410 23817161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1157 8 301 CBL-interacting serine-threonine protein kinases AT2G30360 33.333 5.33e-48 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Apr10g1157 Pkinase 2.6e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1157 - K08269 gmx:100782508 934.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1157 10 23811410 23817161 Apr10g1157 10 23811410 23817161 ECH